HHsearch alignment for GI: 254780619 and conserved domain: COG0468

Probab=95.49  E-value=0.1  Score=32.22  Aligned_cols=88  Identities=22%  Similarity=0.226  Sum_probs=57.9

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf             61998447531579999999999851468479971521001344555430389768996235572356678999971997
Q gi|254780619|r  219 AVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAI  298 (731)
Q Consensus       219 ~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~  298 (731)
T Consensus        61 ~ItEiyG~~gsGKT~lal~~~~~aq~~g~~a~fIDtE~~l~p~r~~~l~~~~~d~l~v~~~~~~e~q~~i~~~~~~~~~-  139 (279)
T COG0468          61 RITEIYGPESSGKTTLALQLVANAQKPGGKAAFIDTEHALDPERAKQLGVDLLDNLLVSQPDTGEQQLEIAEKLARSGA-  139 (279)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCC-
T ss_conf             5899846887654668999988865379808999589998999999988754215368668977999999999987546-


Q ss_pred             EEEEECCHHHHHHHCCCEEEEEE
Q ss_conf             39994001211001000136774
Q gi|254780619|r  299 SVIVGVRSALFLPFKKLGLIVID  321 (731)
Q Consensus       299 ~IVIGtRSAif~P~~nLglIIvD  321 (731)
T Consensus       140 ------~--------~i~LvVVD  148 (279)
T COG0468         140 ------E--------KIDLLVVD  148 (279)
T ss_pred             ------C--------CCCEEEEE
T ss_conf             ------8--------87889982