HHsearch alignment for GI: 254780619 and conserved domain: COG1198

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair].

Probab=97.17  E-value=0.0085  Score=40.50  Aligned_cols=26  Identities=31%  Similarity=0.500  Sum_probs=15.9

Q ss_pred             CHHHHHHHHHHCCCCCH-HHHCCCCCCCC
Q ss_conf             28998888520485200-01023211358
Q gi|254780619|r  494 GIERIAEEVCEYFPLAR-ISILSSDLEGG  521 (731)
Q Consensus       494 Gte~~~e~l~~~fp~~~-v~~~d~d~~~~  521 (731)
T Consensus       540 GTQmiaKG--~~fp~vtLVgvl~aD~~L~  566 (730)
T COG1198         540 GTQMIAKG--HDFPNVTLVGVLDADTGLG  566 (730)
T ss_pred             CCHHHHCC--CCCCCCEEEEEEECHHHHC
T ss_conf             41666427--8866631899996314315