HHsearch alignment for GI: 254780619 and conserved domain: COG1200
>COG1200 RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription].
Probab=100.00 E-value=4.4e-38 Score=310.31 Aligned_cols=356 Identities=27% Similarity=0.400 Sum_probs=277.3
Q ss_pred CCC-CCCHHHHHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCC--
Q ss_conf 666-688378999999987520489-6199844753157999999999985146847997152100134455543038--
Q gi|254780619|r 195 SLP-ILDKNQQDVVEQVVPLCTKGF-AVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRF-- 270 (731)
Q Consensus 195 ~~~-~Lt~eQ~~a~~~i~~~~~~~f-~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF-- 270 (731)
T Consensus 258 ~LPF~LT~aQ~~vi~EI~~Dl~~~~~M~RLlQGDVGSGKTvVA~laml~ai~~G~Q~ALMAPTEILA~QH~~~~~~~l~~ 337 (677)
T COG1200 258 ALPFKLTNAQKRVIKEILADLASPVPMNRLLQGDVGSGKTVVALLAMLAAIEAGYQAALMAPTEILAEQHYESLRKWLEP 337 (677)
T ss_pred HCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 58997678999999999866448666678752676777899999999999872881688663799999999999987665
Q ss_pred -CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH---HHHCCCEEEEEEECCCCCCHHCCCCCC--CHHHHHHH
Q ss_conf -976899623557235667899997199739994001211---001000136774055321000024432--24899999
Q gi|254780619|r 271 -GVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF---LPFKKLGLIVIDEEHDISYKQEEGILY--NARDMSIV 344 (731)
Q Consensus 271 -~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif---~P~~nLglIIvDEEHd~sykq~~~pry--~aRdvA~~ 344 (731)
T Consensus 338 ~~i~V~lLtG~~kgk~r~~~l~~l~~G~~~ivVGTH-ALiQd~V~F~~LgLVIiDEQH----------RFGV~QR~~--L 404 (677)
T COG1200 338 LGIRVALLTGSLKGKARKEILEQLASGEIDIVVGTH-ALIQDKVEFHNLGLVIIDEQH----------RFGVHQRLA--L 404 (677)
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECC-HHHHCCEEECCEEEEEEECCC----------CCCHHHHHH--H
T ss_conf 197489864466506799999987479989799722-122045044202389972521----------022999999--9
Q ss_pred HHHHC-CCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
Q ss_conf 75110-32100002454324677532123444124322367654332110222233222454798999999886226551
Q gi|254780619|r 345 RGKIE-SFPVVLVSATPSIESRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRGQTIAQGKSLSPEMIDGIRHTLARNEQ 423 (731)
Q Consensus 345 Ra~~~-~~~lilgSATPSles~~~~~~g~~~~~~l~~R~~~~~~P~i~ivDm~~~~~~~~~~lS~~l~~~i~~~l~~g~q 423 (731)
T Consensus 405 ~~KG~~~Ph~LvMTATPIPRTLAlt~fgDldvS~IdElP~GRkpI~T~~i--~~~~-------~~~v~e~i~~ei~~GrQ 475 (677)
T COG1200 405 REKGEQNPHVLVMTATPIPRTLALTAFGDLDVSIIDELPPGRKPITTVVI--PHER-------RPEVYERIREEIAKGRQ 475 (677)
T ss_pred HHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEE--CCCC-------HHHHHHHHHHHHHCCCE
T ss_conf 97378999679995798507889888614630111257989974089996--4444-------79999999999974997
Q ss_pred EEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
Q ss_conf 79974222000000235654343101465201211357832000021024465556667874110013542899888852
Q gi|254780619|r 424 TLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACGFGIERIAEEVC 503 (731)
Q Consensus 424 vll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G~Gte~~~e~l~ 503 (731)
T Consensus 476 aY~V--------------------c-----PLIe--------------------------eSE~l~l--~~a~~~~~~L~ 502 (677)
T COG1200 476 AYVV--------------------C-----PLIE--------------------------ESEKLEL--QAAEELYEELK 502 (677)
T ss_pred EEEE--------------------E-----CCCC--------------------------CCCCCHH--HHHHHHHHHHH
T ss_conf 9999--------------------5-----2535--------------------------4331136--54999999999
Q ss_pred HCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 04852000102321135867899999862125765798704430231134520123300034431024557899999875
Q gi|254780619|r 504 EYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLS 583 (731)
Q Consensus 504 ~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~ 583 (731)
T Consensus 503 ~~~~~~~vgL~HGrm-~~-~eKd~vM~~Fk~~e~~ILVaTTVIEVGVdVPnATvMVIe~AERFG-----------LaQLH 569 (677)
T COG1200 503 SFLPELKVGLVHGRM-KP-AEKDAVMEAFKEGEIDILVATTVIEVGVDVPNATVMVIENAERFG-----------LAQLH 569 (677)
T ss_pred HHCCCCEEEEEECCC-CH-HHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEECHHHHH-----------HHHHH
T ss_conf 870546367775689-86-779999999980887689981389952357887079996543303-----------78888
Q ss_pred HHHHCCCCCCCCCEEEEEECCCCCHH-HHHH--H--HCCHHHHHHHHHHHHH--------HCCCCCCH
Q ss_conf 43110256678868999932986488-8999--9--5897999999999999--------81888801
Q gi|254780619|r 584 QVTGRAGRFGLKSLGLIQAYQPTHPV-MQAL--V--SGDADSFYESEIRARE--------SVNLPPFG 638 (731)
Q Consensus 584 qv~gRagr~~~~g~v~iQt~~p~~~~-~~~~--~--~~d~~~f~~~el~~R~--------~~~~PPf~ 638 (731)
T Consensus 570 QLRGRVGRG~~qSyC~Ll~~~~~~~~a~~RL~im~~t~DGF~IAE~DLklRGpGe~lG~rQSG~~~f~ 637 (677)
T COG1200 570 QLRGRVGRGDLQSYCVLLYKPPLSEVAKQRLKIMRETTDGFVIAEEDLKLRGPGELLGTRQSGLPEFR 637 (677)
T ss_pred HHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEE
T ss_conf 75265578875448999967987756899999887448760104656741388654687556886547