HHsearch alignment for GI: 254780619 and conserved domain: COG1200

Probab=97.58  E-value=0.00067  Score=48.91  Aligned_cols=92  Identities=17%  Similarity=0.326  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEECCCH--------HHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHHHCCCCE
Q ss_conf             15799999999998514684799715210--------013445554303897-689962355723566789999719973
Q gi|254780619|r  229 SGKTEVYLEIVAAVLHLGKQVLILLPEIS--------LTSAILERFQKRFGV-KPAEWHSSLSTSMREKIWRQVARGAIS  299 (731)
Q Consensus       229 SGKTEVYl~li~~~L~~GkqvLiLvPEI~--------Lt~Q~~~rl~~rF~~-~v~v~HS~ls~~eR~~~w~~i~~G~~~  299 (731)
T Consensus       457 ~~~~~v~-e~i~~ei~~GrQaY~VcPLIeeSE~l~l~~a~~~~~~L~~~~~~~~vgL~HGrm~~~eKd~vM~~Fk~~e~~  535 (677)
T COG1200         457 ERRPEVY-ERIREEIAKGRQAYVVCPLIEESEKLELQAAEELYEELKSFLPELKVGLVHGRMKPAEKDAVMEAFKEGEID  535 (677)
T ss_pred             CCHHHHH-HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
T ss_conf             4479999-999999974997999952535433113654999999999870546367775689867799999999808876


Q ss_pred             EEEECCHH-HHHHHCCCEEEEEE
Q ss_conf             99940012-11001000136774
Q gi|254780619|r  300 VIVGVRSA-LFLPFKKLGLIVID  321 (731)
Q Consensus       300 IVIGtRSA-if~P~~nLglIIvD  321 (731)
T Consensus       536 ILVaTTVIEVGVdVPnATvMVIe  558 (677)
T COG1200         536 ILVATTVIEVGVDVPNATVMVIE  558 (677)
T ss_pred             EEEEEEEEEECCCCCCCEEEEEE
T ss_conf             89981389952357887079996