HHsearch alignment for GI: 254780619 and conserved domain: COG1203

>COG1203 CRISPR-associated helicase Cas3 [Defense mechanisms].
Probab=95.64  E-value=0.067  Score=33.61  Aligned_cols=24  Identities=4%  Similarity=0.076  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHCCCCC-CEEEEEHHH
Q ss_conf             789999986212576-579870443
Q gi|254780619|r  523 GRLQLQLSAIAKGEI-DIIIGTQLV  546 (731)
Q Consensus       523 ~~~~~~~~~~~~~~~-~ilvgTq~i  546 (731)
T Consensus       451 ~~Aie~Y~~Lk~~~~~v~LlHSRf~  475 (733)
T COG1203         451 DRAIELYEKLKEKGPKVLLLHSRFT  475 (733)
T ss_pred             HHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             9999999998555895799886355