HHsearch alignment for GI: 254780619 and conserved domain: COG3267
>COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].
Probab=92.28 E-value=0.71 Score=25.80 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 88378999999987520489619984475315799999999998514684799715210013445554303897689962
Q gi|254780619|r 199 LDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWH 278 (731)
Q Consensus 199 Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~H 278 (731)
T Consensus 32 ~~a~h~e~l~~l~~~i~d~qg~~~vtGevGsGKTv~~-Ral~~s~~~d~~~~v~i~~~~~s------------------- 91 (269)
T COG3267 32 WAADHNEALLMLHAAIADGQGILAVTGEVGSGKTVLR-RALLASLNEDQVAVVVIDKPTLS------------------- 91 (269)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH-HHHHHHCCCCCEEEEEECCCCHH-------------------
T ss_conf 3200159999977777517855999744777636999-99998557885179983576301-------------------
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEC------C--HHHHHHHCCCEEEEEEECCCCCCHHCCCCC
Q ss_conf 35572356678999971997399940------0--121100100013677405532100002443
Q gi|254780619|r 279 SSLSTSMREKIWRQVARGAISVIVGV------R--SALFLPFKKLGLIVIDEEHDISYKQEEGIL 335 (731)
Q Consensus 279 S~ls~~eR~~~w~~i~~G~~~IVIGt------R--SAif~P~~nLglIIvDEEHd~sykq~~~pr 335 (731)
T Consensus 92 ----~~~~~~ai~~~l~~~p~~~~~~~~e~~~~~L~al~~~g~r~v~l~vdEah~L~~~~le~Lr 152 (269)
T COG3267 92 ----DATLLEAIVADLESQPKVNVNAVLEQIDRELAALVKKGKRPVVLMVDEAHDLNDSALEALR 152 (269)
T ss_pred ----HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHH
T ss_conf ----7889999999840583200688999999999999981788737850167661754899999