HHsearch alignment for GI: 254780619 and conserved domain: COG3357
>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription].
Probab=93.47 E-value=0.076 Score=33.22 Aligned_cols=50 Identities=22% Similarity=0.397 Sum_probs=33.4
Q ss_pred HHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECC
Q ss_conf 99998862265517997422200000023565434310146520121135783200002102446555666787411001
Q gi|254780619|r 411 IDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIA 490 (731)
Q Consensus 411 ~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~ 490 (731)
T Consensus 40 L~hiak~lkr~g~~Llv~P-------a~CkkCGfef~~~----------------------~ik~pSRCP~CKSE-~Ie~ 89 (97)
T COG3357 40 LEHIAKSLKRKGKRLLVRP-------ARCKKCGFEFRDD----------------------KIKKPSRCPKCKSE-WIEE 89 (97)
T ss_pred HHHHHHHHHHCCCEEEECC-------HHHCCCCCCCCCC----------------------CCCCCCCCCCCHHH-CCCC
T ss_conf 9999999974786688547-------3222268623655----------------------46786669853143-0458