HHsearch alignment for GI: 254780619 and conserved domain: KOG0334
>KOG0334 consensus.
Probab=98.73 E-value=3.5e-06 Score=66.35 Aligned_cols=287 Identities=21% Similarity=0.274 Sum_probs=156.0
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH-HHHHHHHHH-------CCCCEEEEECCCHHHHHHHHH---HHC
Q ss_conf 837899999998752048961998447531579999-999999851-------468479971521001344555---430
Q gi|254780619|r 200 DKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVY-LEIVAAVLH-------LGKQVLILLPEISLTSAILER---FQK 268 (731)
Q Consensus 200 t~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVY-l~li~~~L~-------~GkqvLiLvPEI~Lt~Q~~~r---l~~ 268 (731)
T Consensus 389 ~~IQ~qAiP~Ims----G-rdvIgvakTgSGKT~af~LPmirhi~dQr~~~~gdGPi~li~aPtrela~QI~r~~~kf~k 463 (997)
T KOG0334 389 TPIQAQAIPAIMS----G-RDVIGVAKTGSGKTLAFLLPMIRHIKDQRPLEEGDGPIALILAPTRELAMQIHREVRKFLK 463 (997)
T ss_pred CCHHHHHCCHHCC----C-CCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 7556643012225----7-7458773268862034421155542047971107886479973777899999999999877
Q ss_pred CCCCEEE-EEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHH-------HHCCCE---EEEEEECCCCCCHHCCC--CC
Q ss_conf 3897689-96235572356678999971997399940012110-------010001---36774055321000024--43
Q gi|254780619|r 269 RFGVKPA-EWHSSLSTSMREKIWRQVARGAISVIVGVRSALFL-------PFKKLG---LIVIDEEHDISYKQEEG--IL 335 (731)
Q Consensus 269 rF~~~v~-v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif~-------P~~nLg---lIIvDEEHd~sykq~~~--pr 335 (731)
T Consensus 464 ~l~ir~v~vy----gg~~~~~qiaelkRg-~eIvV~tpGRmiD~l~~n~grvtnlrR~t~lv~dea-Drmf--dmgfePq 535 (997)
T KOG0334 464 LLGIRVVCVY----GGSGISQQIAELKRG-AEIVVCTPGRMIDILCANSGRVTNLRRVTYLVLDEA-DRMF--DMGFEPQ 535 (997)
T ss_pred HCCCEEEEEC----CCCCHHHHHHHHHCC-CCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECHH-HHHH--HCCCCCC
T ss_conf 4176279842----785188789998678-965996450323366615776233101103554112-3544--0045754
Q ss_pred CCHHHHHHHHHHHCCCCEECCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCC------------CCCC
Q ss_conf 2248999997511032100002454--3246775321234441243223676543321102222------------3322
Q gi|254780619|r 336 YNARDMSIVRGKIESFPVVLVSATP--SIESRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRG------------QTIA 401 (731)
Q Consensus 336 y~aRdvA~~Ra~~~~~~lilgSATP--Sles~~~~~~g~~~~~~l~~R~~~~~~P~i~ivDm~~------------~~~~ 401 (731)
T Consensus 536 -~~~-I-i~nl-rpdrQtvlfSatfpr~m~~la~~------vl~---------~Pveiiv~~~svV~k~V~q~v~V~~~- 595 (997)
T KOG0334 536 -ITR-I-LQNL-RPDRQTVLFSATFPRSMEALARK------VLK---------KPVEIIVGGRSVVCKEVTQVVRVCAI- 595 (997)
T ss_pred -CEE-H-HHHC-CHHHHHHHHHHHHHHHHHHHHHH------HHC---------CCEEEEECCCEEEECCEEEEEEEECC-
T ss_conf -040-9-7646-60354345662206999999988------615---------88089974630574240489998148-
Q ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCC
Q ss_conf 24547989999998862265517997422200000023565434310146520121135783200002102446555666
Q gi|254780619|r 402 QGKSLSPEMIDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVV 481 (731)
Q Consensus 402 ~~~~lS~~l~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~ 481 (731)
T Consensus 596 e~eKf-~kL~eLl~e~~e~~-~tiiF-----------v~~qe~~d~l~---~~L~-----------------~ag~~~~s 642 (997)
T KOG0334 596 ENEKF-LKLLELLGERYEDG-KTIIF-----------VDKQEKADALL---RDLQ-----------------KAGYNCDS 642 (997)
T ss_pred CHHHH-HHHHHHHHHHHHCC-CEEEE-----------ECCCHHHHHHH---HHHH-----------------HCCCCHHH
T ss_conf 36779-99999999886248-87999-----------84714788999---9998-----------------56860543
Q ss_pred CCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHH
Q ss_conf 78741100135428998888520485200010232113586789999986212576579870443023113452012330
Q gi|254780619|r 482 CGSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVV 561 (731)
Q Consensus 482 Cg~~~~l~~~G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il 561 (731)
T Consensus 643 --------------------lHGgv~--------------q~dR~sti~dfK~~~~~LLvaTsvvarGLdv~~l~Lvvny 688 (997)
T KOG0334 643 --------------------LHGGVD--------------QHDRSSTIEDFKNGVVNLLVATSVVARGLDVKELILVVNY 688 (997)
T ss_pred --------------------HCCCCC--------------HHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCEEEEEEC
T ss_conf --------------------057875--------------6778858999745674289851454267666540589973
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 0034431024557899999875431102566788689
Q gi|254780619|r 562 DGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLG 598 (731)
Q Consensus 562 ~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v 598 (731)
T Consensus 689 d--~pnh~ed----------yvhR~gRTgragrkg~A 713 (997)
T KOG0334 689 D--FPNHYED----------YVHRVGRTGRAGRKGAA 713 (997)
T ss_pred C--CCHHHHH----------HHHHHCCCCCCCCCCEE
T ss_conf 6--6312799----------99985135667776337