HHsearch alignment for GI: 254780619 and conserved domain: KOG0346
>KOG0346 consensus.
Probab=98.93 E-value=8.9e-09 Score=86.24 Aligned_cols=385 Identities=21% Similarity=0.248 Sum_probs=182.8
Q ss_pred HHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 77099989997524557223445541023566543446666883789999999875204896199844753157999999
Q gi|254780619|r 158 RASQVSSHVIDGLKAQGVIKQIFEVISPVVDSPNLYFSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLE 237 (731)
Q Consensus 158 ~~~~~s~~~i~~L~~kglI~~~~~~~~~~~~~~~~~~~~~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~ 237 (731)
T Consensus 22 e~~gLD~RllkAi~~lG~ekp---------------------TlIQs~aIpla---LEgK--DvvarArTGSGKT~AYli 75 (569)
T KOG0346 22 EEFGLDSRLLKAITKLGWEKP---------------------TLIQSSAIPLA---LEGK--DVVARARTGSGKTAAYLI 75 (569)
T ss_pred HHHCCCHHHHHHHHHHCCCCC---------------------CHHHHCCCCHH---HCCC--CEEEEECCCCCCHHHHHH
T ss_conf 871888899999997176776---------------------23443221243---2486--314652268871378899
Q ss_pred -HHHHHHH--------CCCCEEEEECCCHHHHHHHHHHHCC---CC--CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE
Q ss_conf -9999851--------4684799715210013445554303---89--76899623557235667899997199739994
Q gi|254780619|r 238 -IVAAVLH--------LGKQVLILLPEISLTSAILERFQKR---FG--VKPAEWHSSLSTSMREKIWRQVARGAISVIVG 303 (731)
Q Consensus 238 -li~~~L~--------~GkqvLiLvPEI~Lt~Q~~~rl~~r---F~--~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIG 303 (731)
T Consensus 76 Pllqkll~~k~t~~~e~~~sa~iLvPTkEL~qQvy~viekL~~~c~k~lr~~nl~s~~sdsv~~-~---~L~d~pdIvV~ 151 (569)
T KOG0346 76 PLLQKLLAEKKTNDGEQGPSAVILVPTKELAQQVYKVIEKLVEYCSKDLRAINLASSMSDSVNS-V---ALMDLPDIVVA 151 (569)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-H---HHCCCCCEEEE
T ss_conf 9999999764036432463069992509999999999999999878765554210331167778-8---87059975871
Q ss_pred CCHHHH--------HHHCCCEEEEEEECCCC--CCHHCCCCCCCHHHHHHHHHHH-CCCCEECCCCCCCHHHHHH---HH
Q ss_conf 001211--------00100013677405532--1000024432248999997511-0321000024543246775---32
Q gi|254780619|r 304 VRSALF--------LPFKKLGLIVIDEEHDI--SYKQEEGILYNARDMSIVRGKI-ESFPVVLVSATPSIESRVN---GI 369 (731)
Q Consensus 304 tRSAif--------~P~~nLglIIvDEEHd~--sykq~~~pry~aRdvA~~Ra~~-~~~~lilgSATPSles~~~---~~ 369 (731)
T Consensus 152 TP~~ll~~~~~~~~~~~~~l~~LVvDEA-DLllsf------GYe-edlk~l~~~LPr~~Q~~LmSATl~dDv~~LKkL~l 223 (569)
T KOG0346 152 TPAKLLRHLAAGVLEYLDSLSFLVVDEA-DLLLSF------GYE-EDLKKLRSHLPRIYQCFLMSATLSDDVQALKKLFL 223 (569)
T ss_pred CHHHHHHHHHHCCCHHHHHEEEEEECHH-HHHHHC------CCH-HHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHC
T ss_conf 7188999986063021201025785035-666423------608-88999987488256502003135567999999751
Q ss_pred HHHHHHHCCCCC--CCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC--CCEEHHCCCCCCCCC
Q ss_conf 123444124322--3676543321102222332224547989999998862265517997422--200000023565434
Q gi|254780619|r 370 SRRYHSVHLSTR--YRNSALPHLQVIDMRGQTIAQGKSLSPEMIDGIRHTLARNEQTLLFLNR--RGYAPLTLCQVCGNR 445 (731)
Q Consensus 370 ~g~~~~~~l~~R--~~~~~~P~i~ivDm~~~~~~~~~~lS~~l~~~i~~~l~~g~qvll~lnR--rGya~~~~C~~Cg~~ 445 (731)
T Consensus 224 ~nPv-iLkl~e~el~~~dqL~Qy~v~---cs--e~DKf--lllyallKL~LI~g-KsliFVNtIdr~YrLkLfLeqFGik 294 (569)
T KOG0346 224 HNPV-ILKLTEGELPNPDQLTQYQVK---CS--EEDKF--LLLYALLKLRLIRG-KSLIFVNTIDRCYRLKLFLEQFGIK 294 (569)
T ss_pred CCCE-EEEECCCCCCCCCCCEEEEEE---EC--CCHHH--HHHHHHHHHHHHCC-CEEEEEECHHHHHHHHHHHHHHCCH
T ss_conf 6976-898326668984522589997---03--53068--89999999988627-5499985002468899999980737
Q ss_pred CCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCC--CCHHHHHHHHHHCCCCCHHHHCCCCCCCCHH
Q ss_conf 31014652012113578320000210244655566678741100135--4289988885204852000102321135867
Q gi|254780619|r 446 LKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACG--FGIERIAEEVCEYFPLARISILSSDLEGGGG 523 (731)
Q Consensus 446 ~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G--~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~ 523 (731)
T Consensus 295 sciL--NseL-----P~NSR~Hii~---QFNk-----G~YdivIAtD~s~~~~~~eee~kgk~----~e~~~kndkkskk 355 (569)
T KOG0346 295 SCIL--NSEL-----PANSRCHIIE---QFNK-----GLYDIVIATDDSADGDKLEEEVKGKS----DEKNPKNDKKSKK 355 (569)
T ss_pred HHHH--CCCC-----CCCCHHHHHH---HHHC-----CCEEEEEECCCCCCHHHHHCCCCCCC----CCCCCCCCCCCCC
T ss_conf 6652--5646-----6432122898---8607-----61159997067641355521112544----4568877421244
Q ss_pred HHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
Q ss_conf 89999986212576579870443023113452012330003443102455789999987543110256678868999932
Q gi|254780619|r 524 RLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQAY 603 (731)
Q Consensus 524 ~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v~iQt~ 603 (731)
T Consensus 356 K~--------D~E~-------GVsRGIDF~~V~~Vl--NFD~P~---------t~~s-YIHRvGRTaRg~n~GtalSf-v 407 (569)
T KOG0346 356 KL--------DKES-------GVSRGIDFHHVSNVL--NFDFPE---------TVTS-YIHRVGRTARGNNKGTALSF-V 407 (569)
T ss_pred CC--------CCHH-------CHHCCCCCHHEEEEE--ECCCCC---------CHHH-HHHHCCCCCCCCCCCCEEEE-E
T ss_conf 45--------7011-------212165401211456--137898---------5478-88861222347898725999-6
Q ss_pred CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHE
Q ss_conf 9864888999958979999999999998188880118
Q gi|254780619|r 604 QPTHPVMQALVSGDADSFYESEIRARESVNLPPFGRL 640 (731)
Q Consensus 604 ~p~~~~~~~~~~~d~~~f~~~el~~R~~~~~PPf~~~ 640 (731)
T Consensus 408 ~P~e~~----g~~~le~~~~d~~~~~~~qilqPY~f~ 440 (569)
T KOG0346 408 SPKEEF----GKESLESILKDENRQEGRQILQPYQFR 440 (569)
T ss_pred CCHHHH----HHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 646776----066799997437764274204665100