HHsearch alignment for GI: 254780619 and conserved domain: KOG0390
>KOG0390 consensus.
Probab=93.80 E-value=0.59 Score=26.40 Aligned_cols=128 Identities=20% Similarity=0.209 Sum_probs=81.5
Q ss_pred CCCHHHHHHHHHHHHHHCC-----CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC-------EEEEECCCHHHHHHHHH
Q ss_conf 6883789999999875204-----89619984475315799999999998514684-------79971521001344555
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTK-----GFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQ-------VLILLPEISLTSAILER 265 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~-----~f~~~LL~GvTGSGKTEVYl~li~~~L~~Gkq-------vLiLvPEI~Lt~Q~~~r 265 (731)
T Consensus 238 ~LrPHQ~EG~~FL~knl~g~~~~~~~~GCImAd~~GlGKTlq~IsflwtlLrq~P~~~~~~~k~lVV~P~-sLv~nWkkE 316 (776)
T KOG0390 238 ILRPHQREGFEFLYKNLAGLIRPKNSGGCIMADEPGLGKTLQCISFIWTLLRQFPQAKPLINKPLVVAPS-SLVNNWKKE 316 (776)
T ss_pred HCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCH-HHHHHHHHH
T ss_conf 1281578778997864113111588875472078876407888999999998686755444660798458-888789999
Q ss_pred HHCCCCC-EEEEEECCCCCHH---HHHHHHHHH---CCCCEEEEECCHH----HHHHHCCCEEEEEEECCCC
Q ss_conf 4303897-6899623557235---667899997---1997399940012----1100100013677405532
Q gi|254780619|r 266 FQKRFGV-KPAEWHSSLSTSM---REKIWRQVA---RGAISVIVGVRSA----LFLPFKKLGLIVIDEEHDI 326 (731)
Q Consensus 266 l~~rF~~-~v~v~HS~ls~~e---R~~~w~~i~---~G~~~IVIGtRSA----if~P~~nLglIIvDEEHd~ 326 (731)
T Consensus 317 F~KWl~~~~i~~l~~~~~~~~~w~~~~sil~~~~~~~~~~vli~sye~~~~~~~~il~~~~glLVcDEGHrl 388 (776)
T KOG0390 317 FGKWLGNHRINPLDFYSTKKSSWIKLKSILFLGYKQFTTPVLIISYETASDYCRKILLIRPGLLVCDEGHRL 388 (776)
T ss_pred HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 987425355540454234525666667898862211257878636999999999985478986997798885