HHsearch alignment for GI: 254780619 and conserved domain: KOG0922
>KOG0922 consensus.
Probab=94.89 E-value=0.23 Score=29.56 Aligned_cols=136 Identities=21% Similarity=0.297 Sum_probs=70.0
Q ss_pred CCEEEEECCCCHHHHHHHHH-HHHHHHHCCCCEEEEECC----CHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 96199844753157999999-999985146847997152----1001344555430389768996235572356678999
Q gi|254780619|r 218 FAVSLISGVTGSGKTEVYLE-IVAAVLHLGKQVLILLPE----ISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQ 292 (731)
Q Consensus 218 f~~~LL~GvTGSGKTEVYl~-li~~~L~~GkqvLiLvPE----I~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~ 292 (731)
T Consensus 66 nqvlIviGeTGsGKSTQipQyL~eaG~~~~g~I~~TQPRRVAavslA~RVAeE~~~~lG~~VG-Y~------IRF---ed 135 (674)
T KOG0922 66 NQVLIVIGETGSGKSTQIPQYLAEAGFASSGKIACTQPRRVAAVSLAKRVAEEMGCQLGEEVG-YT------IRF---ED 135 (674)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEE-EE------EEE---CC
T ss_conf 877999848989853327699986265668827750671677888999999985897676222-69------984---56
Q ss_pred HHCCCCEEEEEC-----CHHHHHH-HCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHH---HHCCCCEECCCCCCCHH
Q ss_conf 971997399940-----0121100-10001367740553210000244322489999975---11032100002454324
Q gi|254780619|r 293 VARGAISVIVGV-----RSALFLP-FKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRG---KIESFPVVLVSATPSIE 363 (731)
Q Consensus 293 i~~G~~~IVIGt-----RSAif~P-~~nLglIIvDEEHd~sykq~~~pry~aRdvA~~Ra---~~~~~~lilgSATPSle 363 (731)
T Consensus 136 ~ts~~TrikymTDG~LLRE~l~Dp~LskYsvIIlDEAHERsl~TDi-------LlGlLKki~~~R~~LklIimSATlda~ 208 (674)
T KOG0922 136 STSKDTRIKYMTDGMLLREILKDPLLSKYSVIILDEAHERSLHTDI-------LLGLLKKILKKRPDLKLIIMSATLDAE 208 (674)
T ss_pred CCCCCEEEEEECCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHH-------HHHHHHHHHHCCCCCEEEEEEEEECHH
T ss_conf 6787336999613599998850876454448998322310157889-------999999987327783699992352489
Q ss_pred HHHHHHH
Q ss_conf 6775321
Q gi|254780619|r 364 SRVNGIS 370 (731)
Q Consensus 364 s~~~~~~ 370 (731)
T Consensus 209 kfS~yF~ 215 (674)
T KOG0922 209 KFSEYFN 215 (674)
T ss_pred HHHHHHC
T ss_conf 9999864