HHsearch alignment for GI: 254780619 and conserved domain: KOG0949

Probab=92.52  E-value=0.12  Score=31.62  Aligned_cols=142  Identities=24%  Similarity=0.387  Sum_probs=86.3

Q ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEECCCHHHHHHHHHHHCCCCCE----
Q ss_conf             8378999999987520489619984475315799999999998514--6847997152100134455543038976----
Q gi|254780619|r  200 DKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHL--GKQVLILLPEISLTSAILERFQKRFGVK----  273 (731)
Q Consensus       200 t~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~--GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~----  273 (731)
T Consensus       513 d~WQ~elLDsvDr~-----eSavIVAPTSaGKTfisfY~iEKVLResD~~VVIyvaPtKaLVnQvsa~VyaRF~~~t~~r  587 (1330)
T KOG0949         513 DEWQRELLDSVDRN-----ESAVIVAPTSAGKTFISFYAIEKVLRESDSDVVIYVAPTKALVNQVSANVYARFDTKTFLR  587 (1330)
T ss_pred             CHHHHHHHHHHHCC-----CCEEEEEECCCCCEECCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             38888776655056-----6259982046786100589999998542798799966458776666677887633676563


Q ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEC----CHHHHHH------HCCCEEEEEEECCCCCCHHCCCCCCCHHHHHH
Q ss_conf             8996235572356678999971997399940----0121100------10001367740553210000244322489999
Q gi|254780619|r  274 PAEWHSSLSTSMREKIWRQVARGAISVIVGV----RSALFLP------FKKLGLIVIDEEHDISYKQEEGILYNARDMSI  343 (731)
Q Consensus       274 v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGt----RSAif~P------~~nLglIIvDEEHd~sykq~~~pry~aRdvA~  343 (731)
T Consensus       588 g~sl~g~ltqEYsinp~n------CQVLITvPecleslLlspp~~q~~cerIRyiIfDEVH~iG-~~ed~l---~~Eqll  657 (1330)
T KOG0949         588 GVSLLGDLTQEYSINPWN------CQVLITVPECLESLLLSPPHHQKFCERIRYIIFDEVHLIG-NEEDGL---LWEQLL  657 (1330)
T ss_pred             CHHHHHHHHHHHCCCCHH------CEEEEECHHHHHHHHCCCHHHHHHHHCCEEEEECHHHHCC-CCCCCH---HHHHHH
T ss_conf             134676666773578411------3599974678998863856653022400589711233246-524341---899877


Q ss_pred             HHHHHCCCCEECCCCC
Q ss_conf             9751103210000245
Q gi|254780619|r  344 VRGKIESFPVVLVSAT  359 (731)
Q Consensus       344 ~Ra~~~~~~lilgSAT  359 (731)
T Consensus       658 ---~li~CP~L~LSAT  670 (1330)
T KOG0949         658 ---LLIPCPFLVLSAT  670 (1330)
T ss_pred             ---HHCCCCEEEEECC
T ss_conf             ---7457870687413