HHsearch alignment for GI: 254780619 and conserved domain: KOG1002
>KOG1002 consensus.
Probab=94.58 E-value=0.38 Score=27.91 Aligned_cols=120 Identities=18% Similarity=0.268 Sum_probs=73.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEEECCCHHHHHHHHHHHCCC-C-CE
Q ss_conf 688378999999987520489619984475315799999999998514--6847997152100134455543038-9-76
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHL--GKQVLILLPEISLTSAILERFQKRF-G-VK 273 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~--GkqvLiLvPEI~Lt~Q~~~rl~~rF-~-~~ 273 (731)
T Consensus 184 ~LL~fQkE~l~Wl~~QE~Ss~~GGiLADEMGMGKT---IQtIaLllae~~ra~tLVvaP~VAlm-QW~nEI~~~T~gslk 259 (791)
T KOG1002 184 PLLPFQKEGLAWLTSQEESSVAGGILADEMGMGKT---IQTIALLLAEVDRAPTLVVAPTVALM-QWKNEIERHTSGSLK 259 (791)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCHH---HHHHHHHHHCCCCCCEEEECCHHHHH-HHHHHHHHHCCCCEE
T ss_conf 13144677788887735543124311243146417---99999998623568706975489999-999999876257647
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH--------------------HHHCCCE--EEEEEECCCCC
Q ss_conf 899623557235667899997199739994001211--------------------0010001--36774055321
Q gi|254780619|r 274 PAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF--------------------LPFKKLG--LIVIDEEHDIS 327 (731)
Q Consensus 274 v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif--------------------~P~~nLg--lIIvDEEHd~s 327 (731)
T Consensus 260 v~~YhG~~R~~----nikel~--~YDvVLTty~vvEs~yRk~~~GfrrKngv~ke~SlLHsi~~~RiIlDEAH~IK 329 (791)
T KOG1002 260 VYIYHGAKRDK----NIKELM--NYDVVLTTYAVVESVYRKQDYGFRRKNGVDKEKSLLHSIKFYRIILDEAHNIK 329 (791)
T ss_pred EEEEECCCCCC----CHHHHH--CCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCEEEEEEHHHHCCCC
T ss_conf 99972642357----788860--67679970187888987402342113774245323331010235221202531