HHsearch alignment for GI: 254780619 and conserved domain: KOG4439
>KOG4439 consensus.
Probab=94.30 E-value=0.1 Score=32.16 Aligned_cols=122 Identities=17% Similarity=0.246 Sum_probs=78.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHH-----HC--CCC---EEEEECCCHHHHHHHHHHH
Q ss_conf 6883789999999875204896199844753157999999999985-----14--684---7997152100134455543
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVL-----HL--GKQ---VLILLPEISLTSAILERFQ 267 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L-----~~--Gkq---vLiLvPEI~Lt~Q~~~rl~ 267 (731)
T Consensus 325 ~LmpHQkaal~Wl~wRE~q~~~GGILaddmGLGKTlsmislil~qK~~~~~~~~~~~~a~~TLII~Pa-Sli~qW~~Ev~ 403 (901)
T KOG4439 325 ELMPHQKAALRWLLWRESQPPSGGILADDMGLGKTLSMISLILHQKAARKAREKKGESASKTLIICPA-SLIHQWEAEVA 403 (901)
T ss_pred ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCH-HHHHHHHHHHH
T ss_conf 44514665414310013479998650213345530679999998899987541445655772886739-99998899999
Q ss_pred CCCCC---EEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH-------------HHHCCCE--EEEEEECCC
Q ss_conf 03897---6899623557235667899997199739994001211-------------0010001--367740553
Q gi|254780619|r 268 KRFGV---KPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF-------------LPFKKLG--LIVIDEEHD 325 (731)
Q Consensus 268 ~rF~~---~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif-------------~P~~nLg--lIIvDEEHd 325 (731)
T Consensus 404 ~rl~~n~LsV~~~HG~n~----r~i~~~~L~-~YDvViTTY~lva~~~~~e~~~~~~~spL~~I~W~RVILDEAH~ 474 (901)
T KOG4439 404 RRLEQNALSVYLYHGPNK----REISAKELR-KYDVVITTYNLVANKPDDELEEGKNSSPLARIAWSRVILDEAHN 474 (901)
T ss_pred HHHHHCCEEEEEECCCCC----CCCCHHHHH-HCCEEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 998635007998617861----547888873-25669985211015773033315674277775677753424554