HHsearch alignment for GI: 254780619 and conserved domain: PRK01172
>PRK01172 ski2-like helicase; Provisional.
Probab=94.43 E-value=0.23 Score=29.49 Aligned_cols=84 Identities=21% Similarity=0.238 Sum_probs=57.9
Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH------------------------CCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 999999985146847997152100134455543------------------------03897689962355723566789
Q gi|254780619|r 235 YLEIVAAVLHLGKQVLILLPEISLTSAILERFQ------------------------KRFGVKPAEWHSSLSTSMREKIW 290 (731)
Q Consensus 235 Yl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~------------------------~rF~~~v~v~HS~ls~~eR~~~w 290 (731)
T Consensus 225 ~~~l~~~~~~~~~~~LVF~~sR~~~e~~A~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GVafHHaGL~~~eR~lVE 304 (674)
T PRK01172 225 INSLIKETVNDGGQVLVFVSSRKNAEDYAEMLIQHFPEFNDFKVSSENNNVYDDSLNEMLPHGVAFHHAGLSNEQRRFIE 304 (674)
T ss_pred HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCHHHHHHHHCCEEEECCCCCHHHHHHHH
T ss_conf 99999999966994799950758899999999985321010010315431120999999962828306899989999999
Q ss_pred HHHHCCCCEEEEECCH---HHHHHHCCCEEEEEE
Q ss_conf 9997199739994001---211001000136774
Q gi|254780619|r 291 RQVARGAISVIVGVRS---ALFLPFKKLGLIVID 321 (731)
Q Consensus 291 ~~i~~G~~~IVIGtRS---Aif~P~~nLglIIvD 321 (731)
T Consensus 305 ~~f~~g~i~vl~aT~TLAaGVNlPA---r~VIi~ 335 (674)
T PRK01172 305 EMFRNRYIKVIVATPTLAAGVNLPA---RLVIVR 335 (674)
T ss_pred HHHHCCCCEEEEECCHHHHHCCCCE---EEEEEE
T ss_conf 9998699649971446765447860---599993