HHsearch alignment for GI: 254780619 and conserved domain: PRK01172

>PRK01172 ski2-like helicase; Provisional.
Probab=94.43  E-value=0.23  Score=29.49  Aligned_cols=84  Identities=21%  Similarity=0.238  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH------------------------CCCCCEEEEEECCCCCHHHHHHH
Q ss_conf             999999985146847997152100134455543------------------------03897689962355723566789
Q gi|254780619|r  235 YLEIVAAVLHLGKQVLILLPEISLTSAILERFQ------------------------KRFGVKPAEWHSSLSTSMREKIW  290 (731)
Q Consensus       235 Yl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~------------------------~rF~~~v~v~HS~ls~~eR~~~w  290 (731)
T Consensus       225 ~~~l~~~~~~~~~~~LVF~~sR~~~e~~A~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GVafHHaGL~~~eR~lVE  304 (674)
T PRK01172        225 INSLIKETVNDGGQVLVFVSSRKNAEDYAEMLIQHFPEFNDFKVSSENNNVYDDSLNEMLPHGVAFHHAGLSNEQRRFIE  304 (674)
T ss_pred             HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCHHHHHHHHCCEEEECCCCCHHHHHHHH
T ss_conf             99999999966994799950758899999999985321010010315431120999999962828306899989999999


Q ss_pred             HHHHCCCCEEEEECCH---HHHHHHCCCEEEEEE
Q ss_conf             9997199739994001---211001000136774
Q gi|254780619|r  291 RQVARGAISVIVGVRS---ALFLPFKKLGLIVID  321 (731)
Q Consensus       291 ~~i~~G~~~IVIGtRS---Aif~P~~nLglIIvD  321 (731)
T Consensus       305 ~~f~~g~i~vl~aT~TLAaGVNlPA---r~VIi~  335 (674)
T PRK01172        305 EMFRNRYIKVIVATPTLAAGVNLPA---RLVIVR  335 (674)
T ss_pred             HHHHCCCCEEEEECCHHHHHCCCCE---EEEEEE
T ss_conf             9998699649971446765447860---599993