HHsearch alignment for GI: 254780619 and conserved domain: PRK02362
>PRK02362 ski2-like helicase; Provisional.
Probab=99.75 E-value=1.7e-16 Score=145.18 Aligned_cols=380 Identities=21% Similarity=0.203 Sum_probs=207.9
Q ss_pred HHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 70999899975245572234455410235665434466668837899999998752048961998447531579999999
Q gi|254780619|r 159 ASQVSSHVIDGLKAQGVIKQIFEVISPVVDSPNLYFSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEI 238 (731)
Q Consensus 159 ~~~~s~~~i~~L~~kglI~~~~~~~~~~~~~~~~~~~~~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~l 238 (731)
T Consensus 5 ~l~LP~~~~~~~~~~gI~---------------------~Lyp~Q~eal~~g---l~~g-~NlvvsaPTgsGKTlvAEla 59 (736)
T PRK02362 5 DLPLPDGVIDFYEGSGIE---------------------ELYPPQAEAVEAG---LLEG-KNLLAAIPTASGKTLLAELA 59 (736)
T ss_pred HCCCCHHHHHHHHHCCCC---------------------CCCHHHHHHHHHH---HCCC-CCEEEECCCCCCHHHHHHHH
T ss_conf 239998999999976997---------------------5789999999864---3569-81899799998589999999
Q ss_pred HHHHHHCCCCEEEEECCCHHHHHHHHHHHCC--CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC----HHHH--H
Q ss_conf 9998514684799715210013445554303--897689962355723566789999719973999400----1211--0
Q gi|254780619|r 239 VAAVLHLGKQVLILLPEISLTSAILERFQKR--FGVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVR----SALF--L 310 (731)
Q Consensus 239 i~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~r--F~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtR----SAif--~ 310 (731)
T Consensus 60 il~~l~~g~k~vYi~P~kALa~EK~~~~~~~~~~gi~V~~~tGd~~~~~~---~----l~~~dIiV~T~EK~dsl~r~~~ 132 (736)
T PRK02362 60 MLKAIAEGGKALYIVPLRALASEKFEEFSEFSELGLRVGISTGDYDRRDE---Y----LGRNDIIVATSEKTDSLLRNGA 132 (736)
T ss_pred HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH---H----CCCCCEEEECHHHHHHHHHCCC
T ss_conf 99999839979998587999999999999874579989998089887831---4----3689999999799999984481
Q ss_pred H-HCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHH--HHCCCCEECCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 0-10001367740553210000244322489999975--1103210000245-432467753212344412432236765
Q gi|254780619|r 311 P-FKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRG--KIESFPVVLVSAT-PSIESRVNGISRRYHSVHLSTRYRNSA 386 (731)
Q Consensus 311 P-~~nLglIIvDEEHd~sykq~~~pry~aRdvA~~Ra--~~~~~~lilgSAT-PSles~~~~~~g~~~~~~l~~R~~~~~ 386 (731)
T Consensus 133 ~~l~~v~lVViDEiHli~d-~~RG~~l---E~~lskl~~~~~~iqiIgLSATl~N~~~la~WL~a~--~~~s~~RP--V~ 204 (736)
T PRK02362 133 PWIDDISCVVADEVHLIDS-PNRGPTL---EVTLAKLRRLNPDMQVIALSATIGNADELAAWLDAE--LVDSEWRP--VD 204 (736)
T ss_pred HHHHCCCEEEEECCEEECC-CCCHHHH---HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC--CCCCCCCC--CC
T ss_conf 6765089899817678668-8724999---999999973387743898624558999999983886--21589888--67
Q ss_pred CC-------CCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCC--CCCCCCEEEE
Q ss_conf 43-------32110222233222454798999999886226551799742220000002356543431--0146520121
Q gi|254780619|r 387 LP-------HLQVIDMRGQTIAQGKSLSPEMIDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLK--CLHCSCWLVE 457 (731)
Q Consensus 387 ~P-------~i~ivDm~~~~~~~~~~lS~~l~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~--C~~C~~~l~~ 457 (731)
T Consensus 205 L~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~LVF~~SR~~~--------e~~A~~la~~~~~~~~~ 273 (736)
T PRK02362 205 LREGVFYGGAIHFKDTEREL---EVPSKDEDLNLVLDTLDEGGQCLVFVSSRRNA--------EAFAKRAASALKKALSA 273 (736)
T ss_pred CEEEEEECCEECCCCCCCHH---CCCCCCHHHHHHHHHHHCCCCEEEEEECHHHH--------HHHHHHHHHHHHHCCCH
T ss_conf 55656507701035100300---02564058999999997399069998249999--------99999998752421575
Q ss_pred ECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 13578320000210244655566678741100135428998888520485200010232113586789999986212576
Q gi|254780619|r 458 HRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEI 537 (731)
Q Consensus 458 h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~ 537 (731)
T Consensus 274 -~~~~~l----~~~~~~i~~-~~~~---------~~~-~~L~~~l~~-----GVafHHAGL~--~~~R~lVE~~Fr~g~I 330 (736)
T PRK02362 274 -EEREAL----AGIAEEIRE-VSET---------DTS-KVLADCVRS-----GAAFHHAGLS--REHRELVEEGFRDGLI 330 (736)
T ss_pred -HHHHHH----HHHHHHHHH-CCCC---------CHH-HHHHHHHHC-----CEEEECCCCC--HHHHHHHHHHHHCCCC
T ss_conf -668899----999999973-4442---------035-999999960-----9485159999--8999999999987998
Q ss_pred CEEEEEHHHCCCCCCCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEEEECCCCC--HHH
Q ss_conf 579870443023113452012330003---44310245578999998754311025667--88689999329864--888
Q gi|254780619|r 538 DIIIGTQLVAKGHNFPRMSLVGVVDGD---LGLTNADLRSSERTFQLLSQVTGRAGRFG--LKSLGLIQAYQPTH--PVM 610 (731)
Q Consensus 538 ~ilvgTq~i~kg~~fp~v~lv~il~aD---~~l~~pd~ra~E~~~qll~qv~gRagr~~--~~g~v~iQt~~p~~--~~~ 610 (731)
T Consensus 331 kvl~aTsTLA~GVNLPAr-~VIi~~~~~~~~~~g~~~l~-----~~e~~QM~GRAGRpg~D~~G~aili~~~~~~~~~l~ 404 (736)
T PRK02362 331 KVISSTPTLAAGLNLPAR-RVIIRDYRRYDSGAGMQPIP-----VLEYHQMAGRAGRPRLDPYGEAVLLAKSYDEVDELF 404 (736)
T ss_pred CEEEECCHHHCCCCCCEE-EEEEECCEEECCCCCCEECC-----HHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHH
T ss_conf 389725166505578526-99980436736988833688-----999999985248998898862999967827899999
Q ss_pred HHHHHCCH
Q ss_conf 99995897
Q gi|254780619|r 611 QALVSGDA 618 (731)
Q Consensus 611 ~~~~~~d~ 618 (731)
T Consensus 405 ~~~i~~~~ 412 (736)
T PRK02362 405 ERYIEADA 412 (736)
T ss_pred HHHHCCCC
T ss_conf 99843897