HHsearch alignment for GI: 254780619 and conserved domain: PRK04296

>PRK04296 thymidine kinase; Provisional.
Probab=92.21  E-value=0.83  Score=25.29  Aligned_cols=105  Identities=22%  Similarity=0.312  Sum_probs=61.2

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
Q ss_conf             19984475315799999999998514684799715210013445554303897689962355723566789999719973
Q gi|254780619|r  220 VSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAIS  299 (731)
Q Consensus       220 ~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~  299 (731)
T Consensus         4 L~~i~GpMfSGKTteLi~~~~~~~~~gkkvl~~kp~~D----------~Ry~~~~I~Sh~g~~~--------------~~   59 (197)
T PRK04296          4 LYFIYGAMNSGKSTELLQRAYNYEERGMKVLVFTPAID----------DRYGEGKVVSRIGLSR--------------EA   59 (197)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC----------CCCCCCCEECCCCCEE--------------EE
T ss_conf             99999342788899999999999987995999985344----------6577785786789834--------------68


Q ss_pred             EEEECCHHHH------HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEECC
Q ss_conf             9994001211------00100013677405532100002443224899999751103210000
Q gi|254780619|r  300 VIVGVRSALF------LPFKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLV  356 (731)
Q Consensus       300 IVIGtRSAif------~P~~nLglIIvDEEHd~sykq~~~pry~aRdvA~~Ra~~~~~~lilg  356 (731)
T Consensus        60 ~~v~~~~~i~~~~~~~~~~~~~dvI~IDEaQ--Ff~-~----~~i~~~~~~~-~~~~~~Viv~  114 (197)
T PRK04296         60 ILISSDTDIFELIEEEHEGGKIDCVLIDEAQ--FLD-K----EQVVQLAEVV-DDLGIPVICY  114 (197)
T ss_pred             EEECCHHHHHHHHHHHHCCCCCCEEEECCHH--CCC-H----HHHHHHHHHH-HHCCCEEEEE
T ss_conf             9948789999999876304785689972021--279-8----9999999999-8318589997