HHsearch alignment for GI: 254780619 and conserved domain: PRK05582

>PRK05582 DNA topoisomerase I; Validated.
Probab=94.31  E-value=0.037  Score=35.58  Aligned_cols=41  Identities=24%  Similarity=0.477  Sum_probs=28.7

Q ss_pred             CCCCCCCCEEEEECC--CCCCEECH---HHCCCCCC-----------CCCCCCCCCC
Q ss_conf             310146520121135--78320000---21024465-----------5566678741
Q gi|254780619|r  446 LKCLHCSCWLVEHRS--KKKLYCHQ---CGHSAIYS-----------QSCVVCGSSG  486 (731)
Q Consensus       446 ~~C~~C~~~l~~h~~--~~~l~Ch~---Cg~~~~~~-----------~~Cp~Cg~~~  486 (731)
T Consensus       574 ~~Cp~Cg~~l~~r~~~~G~F~~Cs~yP~Ck~t~~~~~~~~~~~~~~~~~CP~C~~~l  630 (692)
T PRK05582        574 RKCPKCGRELVIKHGRYGEFIACSNYPKCKYTKPIEEEEKLASEELDVKCPECGGKI  630 (692)
T ss_pred             CCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             877567982026726889626578998788977687644444453699799999774