HHsearch alignment for GI: 254780619 and conserved domain: PRK06067
>PRK06067 flagellar accessory protein FlaH; Validated.
Probab=92.10 E-value=0.37 Score=27.96 Aligned_cols=49 Identities=24% Similarity=0.358 Sum_probs=38.4
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 96199844753157999999999985146847997152100134455543
Q gi|254780619|r 218 FAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQ 267 (731)
Q Consensus 218 f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~ 267 (731)
T Consensus 32 g~~~li~G~~G~GKt~~~~~f~~~~~~~g~~~~~~~~ee~-~~~~~~~~~ 80 (241)
T PRK06067 32 GSLILIEGENDTGKSVLSQQFVWGALNQGKRGLAITTENT-SKSYLKQME 80 (241)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC-HHHHHHHHH
T ss_conf 9089998079988799999999999867982999994289-999999999