HHsearch alignment for GI: 254780619 and conserved domain: PRK06266
>PRK06266 transcription initiation factor E subunit alpha; Validated.
Probab=92.76 E-value=0.11 Score=31.98 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=23.7
Q ss_pred CCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHH
Q ss_conf 1014652012113578320000210244655566678741100135428998888520
Q gi|254780619|r 447 KCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACGFGIERIAEEVCE 504 (731)
Q Consensus 447 ~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G~Gte~~~e~l~~ 504 (731)
T Consensus 119 ~C~~c~~R~tFee------------Ame~~F~CP~CG~~--Le~~--DN~~~i~~Lk~ 160 (178)
T PRK06266 119 VCPNGHPKFTFDE------------AMEYGFRCPQCGEM--LEEY--DNSKDIEELKE 160 (178)
T ss_pred ECCCCCCCCCHHH------------HHHCCCCCCCCCCC--CEEC--CCHHHHHHHHH
T ss_conf 8899983005999------------98839969999886--6322--37999999999