HHsearch alignment for GI: 254780619 and conserved domain: PRK06321
>PRK06321 replicative DNA helicase; Provisional.
Probab=93.50 E-value=0.66 Score=26.04 Aligned_cols=132 Identities=17% Similarity=0.183 Sum_probs=78.0
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHH-HCCCCEEEEECCCHHHHHHHHHHHCCC-CCEEE-EEECCCCCHHHHHHHHHHHC
Q ss_conf 6199844753157999999999985-146847997152100134455543038-97689-96235572356678999971
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAAVL-HLGKQVLILLPEISLTSAILERFQKRF-GVKPA-EWHSSLSTSMREKIWRQVAR 295 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~~L-~~GkqvLiLvPEI~Lt~Q~~~rl~~rF-~~~v~-v~HS~ls~~eR~~~w~~i~~ 295 (731)
T Consensus 227 dliviaaRPsmGKTalalnia~~~a~~~~~~v~~fSLEMs-~~ql~~R~ls~~s~i~~~~i~~g~l~~~e~~~~~~a~~~ 305 (472)
T PRK06321 227 NLMILAARPAMGKTALALNIAENFCFQNRLPVGIFSLEMT-VDQLIHRIICSRSEVESKKISVGDLSGRDFQRIVSVVNE 305 (472)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 5799853899977999999999999856994699757799-999999998740376755210479999999999999999
Q ss_pred -CCCEEEEECCHHH-----------HHHHCCCEEEEEEECCCCCCHHCCCC----CC-CHHH--HH------HHHHHHCC
Q ss_conf -9973999400121-----------10010001367740553210000244----32-2489--99------99751103
Q gi|254780619|r 296 -GAISVIVGVRSAL-----------FLPFKKLGLIVIDEEHDISYKQEEGI----LY-NARD--MS------IVRGKIES 350 (731)
Q Consensus 296 -G~~~IVIGtRSAi-----------f~P~~nLglIIvDEEHd~sykq~~~p----ry-~aRd--vA------~~Ra~~~~ 350 (731)
T Consensus 306 l~~~~l~idd~~~~ti~~i~~~~r~~k~~~~l~~vvID------YlqL~~~~~~~~~~~~r~~~i~~isr~lK~lAkel~ 379 (472)
T PRK06321 306 MQEHTLLIDDQPGLKITDLRARARRMKESYDIQFLIID------YLQLLSGSGTLRNSESRQTEISEISRMLKNLARELN 379 (472)
T ss_pred HHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE------EHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 85487578679999899999999999873899879997------277416777777788899999999999999999979
Q ss_pred CCEECCC
Q ss_conf 2100002
Q gi|254780619|r 351 FPVVLVS 357 (731)
Q Consensus 351 ~~lilgS 357 (731)
T Consensus 380 vpvi~Ls 386 (472)
T PRK06321 380 IPILCLS 386 (472)
T ss_pred CCEEEEC
T ss_conf 9799972