HHsearch alignment for GI: 254780619 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=94.94  E-value=0.092  Score=32.59  Aligned_cols=130  Identities=17%  Similarity=0.251  Sum_probs=73.6

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             66883789999999875204896199844753157999999999985146847997152100134455543038976899
Q gi|254780619|r  197 PILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAE  276 (731)
Q Consensus       197 ~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v  276 (731)
T Consensus        79 ~~l~~~~i~~La~~--~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~-----~~~L~~~L~~a-------  144 (254)
T PRK06526         79 RSLKRDTIAHLGTL--DFVTGKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFAT-----AAQWVARLAAA-------  144 (254)
T ss_pred             CCCCHHHHHHHHCC--CHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE-----HHHHHHHHHHH-------
T ss_conf             89899999998637--17765887899899998689999999999998699679987-----79999999998-------


Q ss_pred             EECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCHHHH-HHHHHHHCCCCEEC
Q ss_conf             62355723566789999719973999400121100100013677405532100002443224899-99975110321000
Q gi|254780619|r  277 WHSSLSTSMREKIWRQVARGAISVIVGVRSALFLPFKKLGLIVIDEEHDISYKQEEGILYNARDM-SIVRGKIESFPVVL  355 (731)
Q Consensus       277 ~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif~P~~nLglIIvDEEHd~sykq~~~pry~aRdv-A~~Ra~~~~~~lil  355 (731)
T Consensus       145 -----------------~~------~g~~~~~~~~l~~~dLLIiDe~---g~~~~~~--~~a~~lf~li~~Rye~~S~Ii  196 (254)
T PRK06526        145 -----------------HH------AGRLQDELVKLGRIPLLIVDEV---GYIPFEA--EAANLFFQLVSSRYERASLIV  196 (254)
T ss_pred             -----------------HH------CCCHHHHHHHHHCCCEEEEECC---CCCCCCH--HHHHHHHHHHHHHHCCCCEEE
T ss_conf             -----------------85------5809999998513687765021---3644788--999999999999974588676


Q ss_pred             CCCCCCHHHHHHHH
Q ss_conf             02454324677532
Q gi|254780619|r  356 VSATPSIESRVNGI  369 (731)
Q Consensus       356 gSATPSles~~~~~  369 (731)
T Consensus       197 TSn~~-~~~W~~~f  209 (254)
T PRK06526        197 TSNKP-FGRWGEVF  209 (254)
T ss_pred             ECCCC-HHHHHHHC
T ss_conf             65898-66888864