HHsearch alignment for GI: 254780619 and conserved domain: PRK07219
>PRK07219 DNA topoisomerase I; Validated.
Probab=96.39 E-value=0.0031 Score=43.84 Aligned_cols=39 Identities=28% Similarity=0.539 Sum_probs=17.8
Q ss_pred CCCCCCCEEEEECCC--C-CCEEC---HHHCCCCCC---------CCCCCCCCC
Q ss_conf 101465201211357--8-32000---021024465---------556667874
Q gi|254780619|r 447 KCLHCSCWLVEHRSK--K-KLYCH---QCGHSAIYS---------QSCVVCGSS 485 (731)
Q Consensus 447 ~C~~C~~~l~~h~~~--~-~l~Ch---~Cg~~~~~~---------~~Cp~Cg~~ 485 (731)
T Consensus 672 ~CP~cgg~lv~r~sk~gk~F~gCs~yP~C~~t~~lp~~~~~~~~~e~Cp~Cg~~ 725 (769)
T PRK07219 672 ECPADGGRLVLRQSRYGKRFLGCSNYPKCTVTYPLPQKGIIKKTGEKCPYCGAP 725 (769)
T ss_pred CCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 288999779986378998565179999997525075447645058847778983