HHsearch alignment for GI: 254780619 and conserved domain: PRK08084
>PRK08084 DNA replication initiation factor; Provisional.
Probab=95.56 E-value=0.21 Score=29.77 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=26.3
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HHHHHCCCCEEEEE
Q ss_conf 489619984475315799999999-99851468479971
Q gi|254780619|r 216 KGFAVSLISGVTGSGKTEVYLEIV-AAVLHLGKQVLILL 253 (731)
Q Consensus 216 ~~f~~~LL~GvTGSGKTEVYl~li-~~~L~~GkqvLiLv 253 (731)
T Consensus 43 ~~~~~l~l~G~~G~GKTHL-LqA~~~~~~~~~~~~~yl~ 80 (235)
T PRK08084 43 EHSGYIYLWGREGAGRSHL-LHAACAELSQRGDAVGYVP 80 (235)
T ss_pred CCCCEEEEECCCCCCHHHH-HHHHHHHHHCCCCCEEEEE
T ss_conf 8987699989999888999-9999999970798579987