HHsearch alignment for GI: 254780619 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=94.86  E-value=0.25  Score=29.29  Aligned_cols=132  Identities=17%  Similarity=0.247  Sum_probs=74.4

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             66883789999999875204896199844753157999999999985146847997152100134455543038976899
Q gi|254780619|r  197 PILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAE  276 (731)
Q Consensus       197 ~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v  276 (731)
T Consensus        86 p~i~~~~i~~L~~~~-~fi~~~~Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~-----~~~L~~~L~~--------  151 (269)
T PRK08181         86 PMISKAQVMALAAGD-SWLAKGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTR-----TTDLVQKLQV--------  151 (269)
T ss_pred             CCCCHHHHHHHHCCC-HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE-----HHHHHHHHHH--------
T ss_conf             998999999996567-58864870899899998788999999999998799399978-----9999999999--------


Q ss_pred             EECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHH-HHHHHCCCCEEC
Q ss_conf             6235572356678999971997399940012110010001367740553210000244322489999-975110321000
Q gi|254780619|r  277 WHSSLSTSMREKIWRQVARGAISVIVGVRSALFLPFKKLGLIVIDEEHDISYKQEEGILYNARDMSI-VRGKIESFPVVL  355 (731)
Q Consensus       277 ~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif~P~~nLglIIvDEEHd~sykq~~~pry~aRdvA~-~Ra~~~~~~lil  355 (731)
T Consensus       152 ----------------a~~------~~~~~~~~~~l~~~dLLIiDe---~G~~~~~~--~~~~~lf~lI~~Rye~~S~II  204 (269)
T PRK08181        152 ----------------ARR------ELQLESAIAKLDKFDLLILDD---LAYVTKDQ--AETSVLFELISARYERRSILI  204 (269)
T ss_pred             ----------------HHH------CCCHHHHHHHHHCCCEEEEHH---CCCCCCCH--HHHHHHHHHHHHHHCCCCEEE
T ss_conf             ----------------775------583999999974446012201---05667998--999999999999857888899


Q ss_pred             CCCCCCHHHHHHHHH
Q ss_conf             024543246775321
Q gi|254780619|r  356 VSATPSIESRVNGIS  370 (731)
Q Consensus       356 gSATPSles~~~~~~  370 (731)
T Consensus       205 TSn~~-~~~W~~~f~  218 (269)
T PRK08181        205 TANQP-FGEWNRVFP  218 (269)
T ss_pred             ECCCC-HHHHHHHCC
T ss_conf             88999-778877538