HHsearch alignment for GI: 254780619 and conserved domain: PRK08533

>PRK08533 flagellar accessory protein FlaH; Reviewed.

Probab=91.42  E-value=1.2  Score=24.16  Aligned_cols=38  Identities=21%  Similarity=0.324  Sum_probs=35.4

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             61998447531579999999999851468479971521
Q gi|254780619|r  219 AVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEI  256 (731)
Q Consensus       219 ~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI  256 (731)
T Consensus        25 s~~li~G~~GtGKsi~~~~~~~~~l~~g~~~~yis~e~   62 (230)
T PRK08533         25 SIILIEGDESTGKSILSQRLAYGFLQNGYSVSYVSSQL   62 (230)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             48999868998789999999999987898699999438