HHsearch alignment for GI: 254780619 and conserved domain: PRK08620

>PRK08620 DNA topoisomerase III; Provisional.
Probab=96.63  E-value=0.0014  Score=46.47  Aligned_cols=53  Identities=28%  Similarity=0.595  Sum_probs=38.4

Q ss_pred             CCEEEEEECCCCEEHHCCCCC--CCCC--------CCCCCCCCEEEEECC--CCCCEECHHHCCCCCC
Q ss_conf             551799742220000002356--5434--------310146520121135--7832000021024465
Q gi|254780619|r  421 NEQTLLFLNRRGYAPLTLCQV--CGNR--------LKCLHCSCWLVEHRS--KKKLYCHQCGHSAIYS  476 (731)
Q Consensus       421 g~qvll~lnRrGya~~~~C~~--Cg~~--------~~C~~C~~~l~~h~~--~~~l~Ch~Cg~~~~~~  476 (731)
T Consensus       616 g~~m~~~~gr~G--kf~~C~~peC~~~k~~~~~~~~~Cp~C~~~~~~~~~~~g~~~~c~-~~~~e~~~  680 (726)
T PRK08620        616 GKFMLEVKGKNG--KMLVCQDRECGHRKNVSRKTNARCPNCKKKLELRGEGEGQIFVCV-CGHREKLS  680 (726)
T ss_pred             CCCCEEEECCCC--CEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCEEEEC-CCCHHHHH
T ss_conf             832116858987--557468998999777102128949999985689856778789973-89887888