HHsearch alignment for GI: 254780619 and conserved domain: PRK08620
>PRK08620 DNA topoisomerase III; Provisional.
Probab=96.63 E-value=0.0014 Score=46.47 Aligned_cols=53 Identities=28% Similarity=0.595 Sum_probs=38.4
Q ss_pred CCEEEEEECCCCEEHHCCCCC--CCCC--------CCCCCCCCEEEEECC--CCCCEECHHHCCCCCC
Q ss_conf 551799742220000002356--5434--------310146520121135--7832000021024465
Q gi|254780619|r 421 NEQTLLFLNRRGYAPLTLCQV--CGNR--------LKCLHCSCWLVEHRS--KKKLYCHQCGHSAIYS 476 (731)
Q Consensus 421 g~qvll~lnRrGya~~~~C~~--Cg~~--------~~C~~C~~~l~~h~~--~~~l~Ch~Cg~~~~~~ 476 (731)
T Consensus 616 g~~m~~~~gr~G--kf~~C~~peC~~~k~~~~~~~~~Cp~C~~~~~~~~~~~g~~~~c~-~~~~e~~~ 680 (726)
T PRK08620 616 GKFMLEVKGKNG--KMLVCQDRECGHRKNVSRKTNARCPNCKKKLELRGEGEGQIFVCV-CGHREKLS 680 (726)
T ss_pred CCCCEEEECCCC--CEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCEEEEC-CCCHHHHH
T ss_conf 832116858987--557468998999777102128949999985689856778789973-89887888