HHsearch alignment for GI: 254780619 and conserved domain: PRK08694
>PRK08694 consensus.
Probab=94.38 E-value=0.46 Score=27.20 Aligned_cols=131 Identities=24% Similarity=0.310 Sum_probs=76.3
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEECCCHHHHHHHHHHHCCCC-CEEE-EEECCCCCHHHHHHHHHHH-
Q ss_conf 61998447531579999999999851468-479971521001344555430389-7689-9623557235667899997-
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAAVLHLGK-QVLILLPEISLTSAILERFQKRFG-VKPA-EWHSSLSTSMREKIWRQVA- 294 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~~L~~Gk-qvLiLvPEI~Lt~Q~~~rl~~rF~-~~v~-v~HS~ls~~eR~~~w~~i~- 294 (731)
T Consensus 219 ~LiVIaaRPsmGKTalalnia~~~a~~~~~~V~~fSLEMs-~~~l~~Rlla~~s~v~~~~i~~g~l~~~e~~~~~~a~~~ 297 (468)
T PRK08694 219 DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMG-GAQLVMRMLGSVGRLDQSVLKTGRLEDEHWGRLNEAVVK 297 (468)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-HHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 4799961786537899999999999847984799778899-999999999972598632110489999999999999999
Q ss_pred CCCCEEEEECCHHHH-----HH-------H-CCCEEEEEEECCCCCCHHCCC------CCCC-----HHHHHHHHHHHCC
Q ss_conf 199739994001211-----00-------1-000136774055321000024------4322-----4899999751103
Q gi|254780619|r 295 RGAISVIVGVRSALF-----LP-------F-KKLGLIVIDEEHDISYKQEEG------ILYN-----ARDMSIVRGKIES 350 (731)
Q Consensus 295 ~G~~~IVIGtRSAif-----~P-------~-~nLglIIvDEEHd~sykq~~~------pry~-----aRdvA~~Ra~~~~ 350 (731)
T Consensus 298 l~~~pl~idd~~~~t~~~i~a~~r~~~~~~~~kl~~vvID------YLqLi~~~~~~~~r~~~i~~isr~L-K~lAkel~ 370 (468)
T PRK08694 298 LSDAPVYIDETPGLTALELRARARRLARQFNNKLGLIVID------YLQLMAGSGRSDNRASELGEISRSL-KALAKELQ 370 (468)
T ss_pred HHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE------HHHHCCCCCCCCCHHHHHHHHHHHH-HHHHHHHC
T ss_conf 8629968976999988799999999999838987389973------6754168887655999999999999-99999979
Q ss_pred CCEECCC
Q ss_conf 2100002
Q gi|254780619|r 351 FPVVLVS 357 (731)
Q Consensus 351 ~~lilgS 357 (731)
T Consensus 371 ipvi~Ls 377 (468)
T PRK08694 371 VPIIALS 377 (468)
T ss_pred CCEEEEC
T ss_conf 9899963