HHsearch alignment for GI: 254780619 and conserved domain: PRK08760
>PRK08760 replicative DNA helicase; Provisional.
Probab=94.96 E-value=0.34 Score=28.20 Aligned_cols=131 Identities=20% Similarity=0.214 Sum_probs=79.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHH-HHCCCCEEEEECCCHHHHHHHHHHHCCC-CCEE-EEEECCCCCHHHHHHHHHHHC
Q ss_conf 619984475315799999999998-5146847997152100134455543038-9768-996235572356678999971
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAAV-LHLGKQVLILLPEISLTSAILERFQKRF-GVKP-AEWHSSLSTSMREKIWRQVAR 295 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~~-L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF-~~~v-~v~HS~ls~~eR~~~w~~i~~ 295 (731)
T Consensus 230 ~LiViaaRPsmGKTalalnia~~~A~~~~~~V~~fSLEMs-~~ql~~Rlls~~s~v~~~~i~~g~l~~~e~~~~~~a~~~ 308 (476)
T PRK08760 230 DLIILAARPAMGKTTFALNIAEYAAIKSKKGVAVFSMEMS-ASQLAMRLISSNGRINAQRLRTGALEDEDWARVTGAIKM 308 (476)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 7799987788747899999999999837997899703699-999999999983389767776489999999999999999
Q ss_pred -CCCEEEEECCHHH-----------HHHHCCCEEEEEEECCCCCCHHCCC------CCC-----CHHHHHHHHHHHCCCC
Q ss_conf -9973999400121-----------1001000136774055321000024------432-----2489999975110321
Q gi|254780619|r 296 -GAISVIVGVRSAL-----------FLPFKKLGLIVIDEEHDISYKQEEG------ILY-----NARDMSIVRGKIESFP 352 (731)
Q Consensus 296 -G~~~IVIGtRSAi-----------f~P~~nLglIIvDEEHd~sykq~~~------pry-----~aRdvA~~Ra~~~~~~ 352 (731)
T Consensus 309 l~~~~l~idD~~~~t~~~ir~~~R~~k~~~~l~lvvID------YLqL~~~~~~~~~r~~~v~~isr~l-K~lAkel~vp 381 (476)
T PRK08760 309 LKETKIFIDDTPGVSPEVLRSKCRRLKREHDLGLIVID------YLQLMSVPGNSENRATEISEISRSL-KGLAKELNVP 381 (476)
T ss_pred HHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE------HHHHCCCCCCCCCHHHHHHHHHHHH-HHHHHHHCCC
T ss_conf 86088168579999999999999999872799879997------0764158888744889999999999-9999997997
Q ss_pred EECCC
Q ss_conf 00002
Q gi|254780619|r 353 VVLVS 357 (731)
Q Consensus 353 lilgS 357 (731)
T Consensus 382 Vi~Ls 386 (476)
T PRK08760 382 VIALS 386 (476)
T ss_pred EEEEC
T ss_conf 89963