HHsearch alignment for GI: 254780619 and conserved domain: PRK08938

>PRK08938 DNA topoisomerase I; Validated.
Probab=93.26  E-value=0.087  Score=32.76  Aligned_cols=45  Identities=20%  Similarity=0.439  Sum_probs=30.6

Q ss_pred             CCCCCCCCEEEEEC--CCCCCEECH---HHCCCCCC----CCCCCCCCCCEECCC
Q ss_conf             31014652012113--578320000---21024465----556667874110013
Q gi|254780619|r  446 LKCLHCSCWLVEHR--SKKKLYCHQ---CGHSAIYS----QSCVVCGSSGKMIAC  491 (731)
Q Consensus       446 ~~C~~C~~~l~~h~--~~~~l~Ch~---Cg~~~~~~----~~Cp~Cg~~~~l~~~  491 (731)
T Consensus       578 ~~Cp~Cg~~l~~k~gr~G~F~~Cs~yP~Ck~t~~~~~~~~~~CP~C~~g-~l~~r  631 (692)
T PRK08938        578 FDCEVCGSPMVIKMGRYGKFYACSNFPDCRNTKAIVKEIGVTCPKCHKG-QVIER  631 (692)
T ss_pred             CCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEE
T ss_conf             9886788600688157884334789988888677665568829599997-45755