HHsearch alignment for GI: 254780619 and conserved domain: PRK08938
>PRK08938 DNA topoisomerase I; Validated.
Probab=93.26 E-value=0.087 Score=32.76 Aligned_cols=45 Identities=20% Similarity=0.439 Sum_probs=30.6
Q ss_pred CCCCCCCCEEEEEC--CCCCCEECH---HHCCCCCC----CCCCCCCCCCEECCC
Q ss_conf 31014652012113--578320000---21024465----556667874110013
Q gi|254780619|r 446 LKCLHCSCWLVEHR--SKKKLYCHQ---CGHSAIYS----QSCVVCGSSGKMIAC 491 (731)
Q Consensus 446 ~~C~~C~~~l~~h~--~~~~l~Ch~---Cg~~~~~~----~~Cp~Cg~~~~l~~~ 491 (731)
T Consensus 578 ~~Cp~Cg~~l~~k~gr~G~F~~Cs~yP~Ck~t~~~~~~~~~~CP~C~~g-~l~~r 631 (692)
T PRK08938 578 FDCEVCGSPMVIKMGRYGKFYACSNFPDCRNTKAIVKEIGVTCPKCHKG-QVIER 631 (692)
T ss_pred CCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEE
T ss_conf 9886788600688157884334789988888677665568829599997-45755