HHsearch alignment for GI: 254780619 and conserved domain: PRK09165

>PRK09165 replicative DNA helicase; Provisional.
Probab=94.18  E-value=0.51  Score=26.91  Aligned_cols=132  Identities=21%  Similarity=0.211  Sum_probs=76.9

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHH---------------HCCCCEEEEECCCHHHHHHHHHHHCCC-CCEEE-EEECCC
Q ss_conf             6199844753157999999999985---------------146847997152100134455543038-97689-962355
Q gi|254780619|r  219 AVSLISGVTGSGKTEVYLEIVAAVL---------------HLGKQVLILLPEISLTSAILERFQKRF-GVKPA-EWHSSL  281 (731)
Q Consensus       219 ~~~LL~GvTGSGKTEVYl~li~~~L---------------~~GkqvLiLvPEI~Lt~Q~~~rl~~rF-~~~v~-v~HS~l  281 (731)
T Consensus       206 dLiIIAARPsmGKTafaLniA~n~A~~~~~~~~~~~~~~~~~g~~V~~FSLEMs-~~ql~~Rlls~~s~V~~~~ir~g~l  284 (484)
T PRK09165        206 DLIILAGRPSMGKTALATNIAFNAAKAYLREAQPDGSKKAVNGGVVGFFSLEMS-AEQLATRILSEQSEISSSKIRRGKI  284 (484)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCHHHHHCCCC
T ss_conf             379996079997789999999999987410222233211368984899947799-9999999999972686135544899


Q ss_pred             CCHHHHHHHHHHH-CCCCEEEEECCHHH-----------HHHHCCCEEEEEEECCCCCCHHCCCC--C--CCHH--HHH-
Q ss_conf             7235667899997-19973999400121-----------10010001367740553210000244--3--2248--999-
Q gi|254780619|r  282 STSMREKIWRQVA-RGAISVIVGVRSAL-----------FLPFKKLGLIVIDEEHDISYKQEEGI--L--YNAR--DMS-  342 (731)
Q Consensus       282 s~~eR~~~w~~i~-~G~~~IVIGtRSAi-----------f~P~~nLglIIvDEEHd~sykq~~~p--r--y~aR--dvA-  342 (731)
T Consensus       285 ~~~e~~~i~~a~~~l~~~~l~IdD~~~~ti~~Ira~~Rr~k~~~gl~livID------YLqLi~~~~~~~~~~R~~ev~~  358 (484)
T PRK09165        285 SEEDFEKLVDASQELQKLPLYIDDTPALSISALRARARRLKRQHGLDLLVID------YLQLIRGSSKRSQDNRVQEISE  358 (484)
T ss_pred             CHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEE------CHHHCCCCCCCCCHHHHHHHHH
T ss_conf             9999999999999997198489779998799999999999986099889995------1763578888861219999999


Q ss_pred             -----HHHHHHCCCCEECCC
Q ss_conf             -----997511032100002
Q gi|254780619|r  343 -----IVRGKIESFPVVLVS  357 (731)
Q Consensus       343 -----~~Ra~~~~~~lilgS  357 (731)
T Consensus       359 Isr~LK~lAkel~ipVi~Ls  378 (484)
T PRK09165        359 ITQGLKALAKELNIPVIALS  378 (484)
T ss_pred             HHHHHHHHHHHHCCCEEEEC
T ss_conf             99999999999699699974