HHsearch alignment for GI: 254780619 and conserved domain: PRK09354

>PRK09354 recA recombinase A; Provisional.
Probab=94.47  E-value=0.35  Score=28.16  Aligned_cols=90  Identities=24%  Similarity=0.259  Sum_probs=61.5

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEE-EEECCCCCH-HHHHHHHHH-HC
Q ss_conf             619984475315799999999998514684799715210013445554303897689-962355723-566789999-71
Q gi|254780619|r  219 AVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPA-EWHSSLSTS-MREKIWRQV-AR  295 (731)
Q Consensus       219 ~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~-v~HS~ls~~-eR~~~w~~i-~~  295 (731)
T Consensus        61 RivEi~G~esSGKTtlal~~iaeaQk~Gg~~a~iDaE~ald~~~a~~l----GVd~d~llv~qpd~~Eqal~i~e~Lvrs  136 (350)
T PRK09354         61 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKL----GVDIDNLLVSQPDTGEQALEIADALVRS  136 (350)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHC----CCCHHHEEEECCCHHHHHHHHHHHHHHC
T ss_conf             089998898777999999999999975994799960002798899984----9771571785686799999999999854


Q ss_pred             CCCEEEEECCHHHHHHH
Q ss_conf             99739994001211001
Q gi|254780619|r  296 GAISVIVGVRSALFLPF  312 (731)
Q Consensus       296 G~~~IVIGtRSAif~P~  312 (731)
T Consensus       137 g~vd~IVvDSVaAL~pk  153 (350)
T PRK09354        137 GAVDLIVVDSVAALVPK  153 (350)
T ss_pred             CCCCEEEEECCCCCCCH
T ss_conf             88418998253345768