HHsearch alignment for GI: 254780619 and conserved domain: PRK09751
>PRK09751 putative ATP-dependent helicase Lhr; Provisional.
Probab=99.16 E-value=4.4e-09 Score=88.59 Aligned_cols=312 Identities=20% Similarity=0.223 Sum_probs=152.3
Q ss_pred CCHHHHHHHHHHHHHHH-H------------CCCCEEEEECCCHHHHHHHHHHHC----------C-----CCCEEEEEE
Q ss_conf 53157999999999985-1------------468479971521001344555430----------3-----897689962
Q gi|254780619|r 227 TGSGKTEVYLEIVAAVL-H------------LGKQVLILLPEISLTSAILERFQK----------R-----FGVKPAEWH 278 (731)
Q Consensus 227 TGSGKTEVYl~li~~~L-~------------~GkqvLiLvPEI~Lt~Q~~~rl~~----------r-----F~~~v~v~H 278 (731)
T Consensus 5 TGSGKTLAAFL~aLd~L~~~~~~~~~~~~~~~~~~VLYISPLKALa~Dv~rNL~~PL~gI~~~~~~~g~~~~~i~V~vRt 84 (1490)
T PRK09751 5 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 84 (1490)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 87439899999999999961455555567889738999592788899999999879988899998625678997586379
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHH--------HCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHH--HHH
Q ss_conf 355723566789999719973999400121100--------1000136774055321000024432248999997--511
Q gi|254780619|r 279 SSLSTSMREKIWRQVARGAISVIVGVRSALFLP--------FKKLGLIVIDEEHDISYKQEEGILYNARDMSIVR--GKI 348 (731)
Q Consensus 279 S~ls~~eR~~~w~~i~~G~~~IVIGtRSAif~P--------~~nLglIIvDEEHd~sykq~~~pry~aRdvA~~R--a~~ 348 (731)
T Consensus 85 GDT~~~eR~r----~~r~PPdILITTPESL~LlLtsk~r~~L~~v~~VIVDEiHala----gsKRGahLaLsLeRL~~l~ 156 (1490)
T PRK09751 85 GDTPAQERSK----LTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVA----GSKRGAHLALSLERLDALL 156 (1490)
T ss_pred CCCCHHHHHH----HHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCHHHH----CCCCHHHHHHHHHHHHHHC
T ss_conf 9999999999----8508998398488999998735699997799899962864420----5883999999999999865
Q ss_pred -CCCCEECCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEC----CCCCCCCCC---------C--CCCCHHHH
Q ss_conf -032100002454-324677532123444124322367654332110----222233222---------4--54798999
Q gi|254780619|r 349 -ESFPVVLVSATP-SIESRVNGISRRYHSVHLSTRYRNSALPHLQVI----DMRGQTIAQ---------G--KSLSPEMI 411 (731)
Q Consensus 349 -~~~~lilgSATP-Sles~~~~~~g~~~~~~l~~R~~~~~~P~i~iv----Dm~~~~~~~---------~--~~lS~~l~ 411 (731)
T Consensus 157 ~~~~qRIGLSATv~p~e~vA~fLgg~-rpv~IV~-~~~~k~~~l~v~vPv~d~~~~~~~~~~~g~~~~~~~~~siw~~v~ 234 (1490)
T PRK09751 157 HTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVN-PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 234 (1490)
T ss_pred CCCCCEEEEECCCCCHHHHHHHHCCC-CCEEEEC-CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 89996899977668999999873799-9837868-888887527997046653333323567763223555453167889
Q ss_pred HHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCC
Q ss_conf 99988622655179974222000000235654343101465201211357832000021024465556667874110013
Q gi|254780619|r 412 DGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIAC 491 (731)
Q Consensus 412 ~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~ 491 (731)
T Consensus 235 ~~i~~~i~~hrsTLVF~NTR~~AErl-~~~L~el~--------------~erl-----~~~~~~~--~~~--~~-~~~~~ 289 (1490)
T PRK09751 235 TGILDEVLRHRSTIVFTNSRGLAEKL-TARLNELY--------------AARL-----QRSPSIA--VDA--AH-FESTS 289 (1490)
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHHH-HHHHHHHH--------------HHHH-----CCCCCCC--CCC--CC-CCCCC
T ss_conf 99999997268769997887999999-99999999--------------9873-----2464322--110--00-01112
Q ss_pred CCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 54289988885204852000102321135867899999862125765798704430231134520123300034431024
Q gi|254780619|r 492 GFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNAD 571 (731)
Q Consensus 492 G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd 571 (731)
T Consensus 290 ~~~~~~~~g-----~-~~~ia~aHHGSlS-ke~R~~vE~~LK~G~LraVVaTSSLELGIDiG~VDlVVQvgsP------- 355 (1490)
T PRK09751 290 GATSNRVQS-----S-DVFIARSHHGSVS-KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATP------- 355 (1490)
T ss_pred CCCCCCCCC-----C-CCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCEEEEECCC-------
T ss_conf 222112356-----6-5433445557689-9999999999867997789977805407764465579980696-------
Q ss_pred HHHHHHHHHHHHHHHHCCCCC
Q ss_conf 557899999875431102566
Q gi|254780619|r 572 LRSSERTFQLLSQVTGRAGRF 592 (731)
Q Consensus 572 ~ra~E~~~qll~qv~gRagr~ 592 (731)
T Consensus 356 -----~sVAs~lQRvGRAGH~ 371 (1490)
T PRK09751 356 -----LSVASGLQRIGRAGHQ 371 (1490)
T ss_pred -----HHHHHHHHHHCCCCCC
T ss_conf -----6788999971012578