HHsearch alignment for GI: 254780619 and conserved domain: PRK13894
>PRK13894 conjugal transfer ATPase TrbB; Provisional.
Probab=90.51 E-value=1.4 Score=23.55 Aligned_cols=41 Identities=29% Similarity=0.403 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 688378999999987520489619984475315799999999998
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAV 242 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~ 242 (731)
T Consensus 133 ~~~~~~a~~L~~~V~~----r~nilI~G~TgsGKTTll~all~~i 173 (320)
T PRK13894 133 IMTAEQREAIIAAVRA----HRNILVIGGTGSGKTTLVNAIINEM 173 (320)
T ss_pred CCCHHHHHHHHHHHHC----CCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9999999999999972----8758998588865689999998632