HHsearch alignment for GI: 254780619 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=94.23 E-value=0.11 Score=31.98 Aligned_cols=38 Identities=37% Similarity=0.512 Sum_probs=28.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
Q ss_conf 446666883789999999875204896199844753157999
Q gi|254780619|r 193 YFSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEV 234 (731)
Q Consensus 193 ~~~~~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEV 234 (731)
T Consensus 118 YV~~gimtaaQ~d~l~~Av~ar----~NIlv~GGTGSGKTTL 155 (315)
T TIGR02782 118 YVEAGIMTAAQRDVLREAVAAR----KNILVVGGTGSGKTTL 155 (315)
T ss_pred HHHHCCCCHHHHHHHHHHHHHC----CCEEEECCCCCCHHHH
T ss_conf 7640445578999999999712----9889981458857999