HHsearch alignment for GI: 254780619 and conserved domain: TIGR03420

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP.
Probab=96.83  E-value=0.026  Score=36.76  Aligned_cols=37  Identities=30%  Similarity=0.355  Sum_probs=25.7

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             8961998447531579999999999851468479971
Q gi|254780619|r  217 GFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILL  253 (731)
Q Consensus       217 ~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLv  253 (731)
T Consensus        37 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~   73 (226)
T TIGR03420        37 GDRFLYLWGESGSGKSHLLQAACAAAEERGKSAIYLP   73 (226)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             8886999899999889999999999862699579952