HHsearch alignment for GI: 254780619 and conserved domain: pfam00271
>pfam00271 Helicase_C Helicase conserved C-terminal domain. The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.
Probab=97.90 E-value=7.4e-06 Score=63.87 Aligned_cols=72 Identities=22% Similarity=0.315 Sum_probs=57.7
Q ss_pred CCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52000102321135867899999862125765798704430231134520123300034431024557899999875431
Q gi|254780619|r 507 PLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVT 586 (731)
Q Consensus 507 p~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~ 586 (731)
T Consensus 6 ~g~~~~~i~g~~--~~~~R~~~~~~f~~~~~~ilv~t~~~~~Gid~~~~~~vi~~~~~------------~s~~~~~Q~~ 71 (78)
T pfam00271 6 PGIKVARLHGGL--SQEEREEILEDFRNGKSKVLVATDVAGRGIDLPDVNVVINYDLP------------WNPASYIQRI 71 (78)
T ss_pred CCCCEEEEECCC--CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCC------------CCHHHHHHHH
T ss_conf 898599986979--99999999999987997399992565256778789999997899------------6989999997
Q ss_pred HCCCCC
Q ss_conf 102566
Q gi|254780619|r 587 GRAGRF 592 (731)
Q Consensus 587 gRagr~ 592 (731)
T Consensus 72 GR~~R~ 77 (78)
T pfam00271 72 GRAGRA 77 (78)
T ss_pred CCCCCC
T ss_conf 268779