HHsearch alignment for GI: 254780619 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=99.00 E-value=1.6e-09 Score=91.93 Aligned_cols=64 Identities=33% Similarity=0.412 Sum_probs=56.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 688378999999987520489619984475315799999999998514684799715210013445554
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTSAILERF 266 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl 266 (731)
T Consensus 3 ~LR~yQ~~a~~~~~~~-----~~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~lvlvp~~~L~~Q~~~~~ 66 (103)
T pfam04851 3 ELRPYQIEAIRNLLEK-----KRGLIVMATGSGKTLTAAKLIARLLKGKKKVLFLVPRKDLLEQALEEF 66 (103)
T ss_pred CCCHHHHHHHHHHHHC-----CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
T ss_conf 8729999999999963-----986999589998799999999999846992999908299999999965