HHsearch alignment for GI: 254780619 and conserved domain: smart00490

Probab=98.17  E-value=1.3e-06  Score=69.69  Aligned_cols=81  Identities=26%  Similarity=0.354  Sum_probs=65.8

Q ss_pred             HHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99888852048520001023211358678999998621257657987044302311345201233000344310245578
Q gi|254780619|r  496 ERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSS  575 (731)
Q Consensus       496 e~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~  575 (731)
T Consensus         1 ~~l~~~l~~~--g~~~~~i~g~~~--~~~R~~~~~~f~~~~~~ilv~t~~~~~Gidl~~~~~vI~~~~~-----------   65 (82)
T smart00490        1 EELAELLKEL--GIKVARLHGGLS--QEEREEILEKFNNGKIKVLVATDVAERGLDLPGVDLVIIYDLP-----------   65 (82)
T ss_pred             CHHHHHHHHC--CCCEEEEECCCC--HHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCEEEEECCC-----------
T ss_conf             9789999888--991999989699--9999999999987997199995024211489889999997899-----------


Q ss_pred             HHHHHHHHHHHHCCCCC
Q ss_conf             99999875431102566
Q gi|254780619|r  576 ERTFQLLSQVTGRAGRF  592 (731)
Q Consensus       576 E~~~qll~qv~gRagr~  592 (731)
T Consensus        66 -~~~~~~~Q~~GR~~R~   81 (82)
T smart00490       66 -WSPASYIQRIGRAGRA   81 (82)
T ss_pred             -CCHHHHHHHHCCCCCC
T ss_conf             -6989999997258789