HHsearch alignment for GI: 254780620 and conserved domain: COG1420

>COG1420 HrcA Transcriptional regulator of heat shock gene [Transcription].
Probab=94.80  E-value=0.098  Score=31.32  Aligned_cols=58  Identities=17%  Similarity=0.189  Sum_probs=51.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH--CCCHHHHHHHHHHHHHCCCEEECC
Q ss_conf             9764568999999999985598633599999981--997899999999993259057315
Q gi|254780620|r    1 MHLTKRTDYGIRVLMYCAIHNDYPNRISQIAEAC--CISELFLFKILQPLVKAGIVETVR   58 (144)
Q Consensus         1 Mkis~~~~yAi~~l~~La~~~~~~~s~~eIA~~~--~i~~~~l~kil~~L~~agli~S~r   58 (144)
T Consensus         2 ~~l~~Rq~~IL~aIV~~Yi~t~ePVGSk~L~e~~~l~~SsATIRN~Ma~LE~~GlI~k~H   61 (346)
T COG1420           2 GKLDERQRLILRAIVEDYLATGEPVGSKTLSEKYNLDLSSATIRNEMADLEKLGLIEKPH   61 (346)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             870079999999999999604991663999987388988462878999998777815765