HHsearch alignment for GI: 254780620 and conserved domain: COG1497
>COG1497 Predicted transcriptional regulator [Transcription].
Probab=94.15 E-value=0.18 Score=29.73 Aligned_cols=66 Identities=21% Similarity=0.331 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHH
Q ss_conf 456899999999998559863359999998199789999999999325905731565454000237212
Q gi|254780620|r 4 TKRTDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPADQ 72 (144)
Q Consensus 4 s~~~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~~ 72 (144)
T Consensus 6 ~kk~~t~fqIL~ei~~~qp-~v~q~eIA~~lgiT~QaVsehiK~Lv~eG~i~~-~gR-~~Y~iTkkG~e 71 (260)
T COG1497 6 SKKNLTRFQILSEIAVRQP-RVKQKEIAKKLGITLQAVSEHIKELVKEGLIEK-EGR-GEYEITKKGAE 71 (260)
T ss_pred CCCCCHHHHHHHHHHHHCC-CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEE-CCC-EEEEEEHHHHH
T ss_conf 4663159899999997588-778889998709879999999999986646661-487-25897266899