HHsearch alignment for GI: 254780620 and conserved domain: COG2345

>COG2345 Predicted transcriptional regulator [Transcription].
Probab=95.54  E-value=0.045  Score=33.32  Aligned_cols=53  Identities=28%  Similarity=0.389  Sum_probs=43.7

Q ss_pred             CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCC-C-----CEECCCHHH
Q ss_conf             5986335999999819978999999999932590573156545-4-----000237212
Q gi|254780620|r   20 HNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRG-G-----VRLCRPADQ   72 (144)
Q Consensus        20 ~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~G-G-----y~Lak~~~~   72 (144)
T Consensus        21 ~~~g~~sa~elA~~Lgis~~avR~HL~~Le~~Glv~~~~~~~g~GRP~~~y~Lt~~g~~   79 (218)
T COG2345          21 KKSGPVSADELAEELGISPMAVRRHLDDLEAEGLVEVERQQGGRGRPAKLYRLTEKGRE   79 (218)
T ss_pred             HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCHH
T ss_conf             31698249999988599989999999999868666876425789997333220026265