HHsearch alignment for GI: 254780620 and conserved domain: COG2345
>COG2345 Predicted transcriptional regulator [Transcription].
Probab=95.54 E-value=0.045 Score=33.32 Aligned_cols=53 Identities=28% Similarity=0.389 Sum_probs=43.7
Q ss_pred CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCC-C-----CEECCCHHH
Q ss_conf 5986335999999819978999999999932590573156545-4-----000237212
Q gi|254780620|r 20 HNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRG-G-----VRLCRPADQ 72 (144)
Q Consensus 20 ~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~G-G-----y~Lak~~~~ 72 (144)
T Consensus 21 ~~~g~~sa~elA~~Lgis~~avR~HL~~Le~~Glv~~~~~~~g~GRP~~~y~Lt~~g~~ 79 (218)
T COG2345 21 KKSGPVSADELAEELGISPMAVRRHLDDLEAEGLVEVERQQGGRGRPAKLYRLTEKGRE 79 (218)
T ss_pred HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCHH
T ss_conf 31698249999988599989999999999868666876425789997333220026265