HHsearch alignment for GI: 254780620 and conserved domain: COG2378
>COG2378 Predicted transcriptional regulator [Transcription].
Probab=96.03 E-value=0.038 Score=33.77 Aligned_cols=69 Identities=20% Similarity=0.328 Sum_probs=51.6
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC-EEECCCCCCCCEECC----CHHHCCHHHHHHH
Q ss_conf 9999999855986335999999819978999999999932590-573156545400023----7212609999999
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGI-VETVRGRRGGVRLCR----PADQITILDVVKA 81 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agl-i~S~rG~~GGy~Lak----~~~~Itl~dI~~a 81 (144)
T Consensus 11 ~~ii~~L~~-~~~-vta~~lA~~~~VS~RTi~RDi~~L~~~gvPI~~e~G~~~gy~~~~~~~L~pl~ft~~E~~Al 84 (311)
T COG2378 11 LQIIQILRA-KET-VTAAELADEFEVSVRTIYRDIATLRAAGVPIEGERGKGGGYRLRPGFKLPPLMFTEEEAEAL 84 (311)
T ss_pred HHHHHHHHH-CCC-CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCCCCCCCCHHHHHHH
T ss_conf 999999985-760-45999998729889999999999997699765325886318960577788666898799999