HHsearch alignment for GI: 254780620 and conserved domain: PRK03911
>PRK03911 heat-inducible transcription repressor; Provisional.
Probab=91.16 E-value=0.66 Score=26.45 Aligned_cols=52 Identities=10% Similarity=0.163 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHC--CCHHHHHHHHHHHHHCCCEEECCC
Q ss_conf 9999999999855986335999999819--978999999999932590573156
Q gi|254780620|r 8 DYGIRVLMYCAIHNDYPNRISQIAEACC--ISELFLFKILQPLVKAGIVETVRG 59 (144)
Q Consensus 8 ~yAi~~l~~La~~~~~~~s~~eIA~~~~--i~~~~l~kil~~L~~agli~S~rG 59 (144)
T Consensus 5 ~~IL~~iVe~Yi~t~~PVgSk~L~~~~~l~~SsATIRn~m~~LE~~G~L~~pHt 58 (258)
T PRK03911 5 DLILDSIIKTYLQDNEPIGSNELKSLMNLKIPASTIRVYFKKLSDEGLITQLHI 58 (258)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999999999995549814779999874999880899999999987867579867