HHsearch alignment for GI: 254780620 and conserved domain: PRK04158

>PRK04158 transcriptional repressor CodY; Validated.
Probab=91.76  E-value=0.29  Score=28.58  Aligned_cols=44  Identities=25%  Similarity=0.323  Sum_probs=35.4

Q ss_pred             CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCE
Q ss_conf             8633599999981997899999999993259057315-6545400
Q gi|254780620|r   22 DYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVR   65 (144)
Q Consensus        22 ~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~   65 (144)
T Consensus       199 EGlLVASkIADrvGITRSVIVNALRKlESAGVIESRSLGMKGTyI  243 (256)
T PRK04158        199 EGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYI  243 (256)
T ss_pred             CCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEE
T ss_conf             552754333443087156778777765314613512577771279