HHsearch alignment for GI: 254780620 and conserved domain: PRK10046
>PRK10046 dpiA two-component response regulator DpiA; Provisional.
Probab=90.44 E-value=1.2 Score=24.83 Aligned_cols=42 Identities=12% Similarity=0.039 Sum_probs=35.5
Q ss_pred HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC
Q ss_conf 9985598633599999981997899999999993259057315
Q gi|254780620|r 16 YCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR 58 (144)
Q Consensus 16 ~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r 58 (144)
T Consensus 170 ~l~-~~~~~~ta~eva~~~giSrvTaRRYLe~L~~~g~~~~~~ 211 (225)
T PRK10046 170 LFK-EPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEI 211 (225)
T ss_pred HHH-CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf 997-179986899999985851999999999998689079983