HHsearch alignment for GI: 254780620 and conserved domain: PRK10225
>PRK10225 DNA-binding transcriptional repressor UxuR; Provisional.
Probab=95.64 E-value=0.041 Score=33.55 Aligned_cols=63 Identities=25% Similarity=0.182 Sum_probs=46.5
Q ss_pred HHHHHHHH-HCCCCCC-CHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHCC
Q ss_conf 99999998-5598633-5999999819978999999999932590573156545400023721260
Q gi|254780620|r 11 IRVLMYCA-IHNDYPN-RISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPADQIT 74 (144)
Q Consensus 11 i~~l~~La-~~~~~~~-s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~~It 74 (144)
T Consensus 18 Lr~~I~~G~l~PGdrLP~EreLAe~lgVSRt~VREAL~~Le~~GLV~~r~G~-Gt~V~~~~~~~~~ 82 (257)
T PRK10225 18 IRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGA-GIYVLDSSGSHNT 82 (257)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECC-EEEEECCCHHHHC
T ss_conf 9999982899997939529999999798878999999999988997996488-7788268704210