HHsearch alignment for GI: 254780620 and conserved domain: PRK10434

>PRK10434 srlR DNA-bindng transcriptional repressor SrlR; Provisional.
Probab=93.81  E-value=0.27  Score=28.71  Aligned_cols=59  Identities=24%  Similarity=0.205  Sum_probs=45.4

Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHCCH
Q ss_conf             9999998559863359999998199789999999999325905731565454000237212609
Q gi|254780620|r   12 RVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPADQITI   75 (144)
Q Consensus        12 ~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~~Itl   75 (144)
T Consensus         9 ~Il~~L~~~--g~v~v~eLa~~l~VS~~TIRRDL~~Le~~G~l~R~---hGGa~~~~~~~~~~~   67 (256)
T PRK10434          9 AILEYLQKQ--GKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRT---YGGVVLNKEESDPPI   67 (256)
T ss_pred             HHHHHHHHC--CCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE---ECEEECCCCCCCCCH
T ss_conf             999999986--97999999998796998999849999878988999---473864777778788