HHsearch alignment for GI: 254780620 and conserved domain: PRK11832
>PRK11832 putative DNA-binding transcriptional regulator; Provisional.
Probab=90.30 E-value=0.34 Score=28.13 Aligned_cols=58 Identities=24% Similarity=0.290 Sum_probs=40.7
Q ss_pred HHHH-HHHHHCCC---CCCCH-HHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCH
Q ss_conf 9999-99985598---63359-9999981997899999999993259057315654540002372
Q gi|254780620|r 11 IRVL-MYCAIHND---YPNRI-SQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPA 70 (144)
Q Consensus 11 i~~l-~~La~~~~---~~~s~-~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~ 70 (144)
T Consensus 142 IR~~L~el~~~~e~~R~~i~v~~yI~~rT~lSRS~im~vls~Lk~ggyI~i~~G~L--~~i~~LP 204 (207)
T PRK11832 142 IRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL--VAINRLP 204 (207)
T ss_pred HHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCEE--EECCCCC
T ss_conf 99999999838999983075999999874420999999999984499789863789--7714577