HHsearch alignment for GI: 254780620 and conserved domain: PRK13626
>PRK13626 transcriptional regulator SgrR; Provisional.
Probab=91.94 E-value=0.78 Score=26.00 Aligned_cols=62 Identities=10% Similarity=0.043 Sum_probs=49.3
Q ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC----CCCEECCCHHHCCHHHHHHHHC
Q ss_conf 8633599999981997899999999993259057315654----5400023721260999999971
Q gi|254780620|r 22 DYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRR----GGVRLCRPADQITILDVVKATE 83 (144)
Q Consensus 22 ~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~----GGy~Lak~~~~Itl~dI~~aie 83 (144)
T Consensus 21 ~~~~tl~elA~~l~cS~Rn~r~lL~~m~~~gWl~W~p~~GRG~~S~L~~l~~~~~l~~~~a~~~l~ 86 (551)
T PRK13626 21 SQETTLNELAELLNCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLE 86 (551)
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHH
T ss_conf 467439999998688857899999999988887860689989875699984899999999999997